Bionetgen

Latest version: v0.8.4

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0.4.4

New info subcommand, major updates to test suite, some updates to error reporting.

0.4.3

Bugfix where the libroadrunner simulator object was not handled correctly.

0.4.2

Changed `bionetgen.run` behavior again, how calling the method with an `out` argument doesn't leave you in the output folder when it's done executing and it will return you back to the folder you started with. Bugfix where parsing a model without actions failed.

0.4.1

Changed `bionetgen.run` behavior when called with a `bngmodel` object. Now the model file is saved and if it exists, it's overwritten with a warning. Slightly better error reporting when the `run` call fails.

0.4.0

Fixed a but where "0" species was being printed as "0()". Action block is now a list and not a dictionary which was disallowing multiple actions of the same type.

0.3.9

A couple bugfixes to plotting, running the CLI on a model can now generate a log file with the option
-l/--log. Failing to run now raises a ValueError (will be changed with custom errors in the future). Added some input and output file checks to notebook subcommand.

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