Bionty

Latest version: v1.0.0

Safety actively analyzes 702540 Python packages for vulnerabilities to keep your Python projects secure.

Scan your dependencies

Page 1 of 8

1.0.0

See https://docs.lamin.ai/changelog

What's Changed
* 🏗️ Integrate `lnschema-core` into `lamindb` by falexwolf in https://github.com/laminlabs/bionty/pull/177
* 🍱 New `Disease` version: `mondo`-`2024-08-06` by Zethson in https://github.com/laminlabs/bionty/pull/182
* 🍱 New `CellType` version: `cl`-`2024-08-16` by Zethson in https://github.com/laminlabs/bionty/pull/183
* ✨ Upgrade Ruff and mypy by Zethson in https://github.com/laminlabs/bionty/pull/184
* 🚚 Migrate to lamindb 1.0 by falexwolf in https://github.com/laminlabs/bionty/pull/178
* 🚚 Deprecate the `--schema` argument of `lamin init` in favor of `--modules` by falexwolf in https://github.com/laminlabs/bionty/pull/185
* 🚚 Rename `FeatureSet` to `Schema` and migrate to lamindb 1.0a5 by falexwolf in https://github.com/laminlabs/bionty/pull/186


**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.53.2...1.0.0

1.0a1

See https://docs.lamin.ai/changelog

What's Changed
* 🏗️ Integrate `lnschema-core` into `lamindb` by falexwolf in https://github.com/laminlabs/bionty/pull/177
* 🍱 New `Disease` version: `mondo`-`2024-08-06` by Zethson in https://github.com/laminlabs/bionty/pull/182
* 🍱 New `CellType` version: `cl`-`2024-08-16` by Zethson in https://github.com/laminlabs/bionty/pull/183
* ✨ Upgrade Ruff and mypy by Zethson in https://github.com/laminlabs/bionty/pull/184
* 🚚 Migrate to lamindb 1.0 by falexwolf in https://github.com/laminlabs/bionty/pull/178


**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.53.2...1.0a1

0.53.2

See https://docs.lamin.ai/changelog

What's Changed
* 🎨 Make search consistent with the lamindb implementation by Koncopd in https://github.com/laminlabs/bionty/pull/170
* 🎨 Simplify coupling to `lamindb_setup` by falexwolf in https://github.com/laminlabs/bionty/pull/171

New Contributors
* Koncopd made their first contribution in https://github.com/laminlabs/bionty/pull/170

**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.53.1...0.53.2

0.53.1

See https://docs.lamin.ai/changelog

What's Changed
* 🔊 Raise error if organism can't be created from bionty by sunnyosun in https://github.com/laminlabs/bionty/pull/167
* ✨ Reintroduce taxa by Zethson in https://github.com/laminlabs/bionty/pull/168


**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.53.0...0.53.1

0.53.0

See https://docs.lamin.ai/changelog

What's Changed
* 📝 Add symbol mapping FAQ reference to Gene by Zethson in https://github.com/laminlabs/bionty/pull/149
* ✅ Clean up test properly by Zethson in https://github.com/laminlabs/bionty/pull/161
* 🎨 Use field defaults by sunnyosun in https://github.com/laminlabs/bionty/pull/158
* 🎨 Squash migrations by sunnyosun in https://github.com/laminlabs/bionty/pull/162
* ✨ Support `taxa="plants"` in `EnsemblGene` by mossjacob in https://github.com/laminlabs/bionty/pull/153
* 🎨 Polish code by Zethson in https://github.com/laminlabs/bionty/pull/164
* ✨Add support for local source files by mossjacob in https://github.com/laminlabs/bionty/pull/156

New Contributors
* mossjacob made their first contribution in https://github.com/laminlabs/bionty/pull/153

**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.52.1...0.53.0

0.52.1

See https://docs.lamin.ai/changelog

What's Changed
* 🐛 Hide from_public from TOC by Zethson in https://github.com/laminlabs/bionty/pull/135
* 🎨 Proper deprecation warning by Zethson in https://github.com/laminlabs/bionty/pull/138
* 🎨 Raise `OrganismNotSet` instead of `AssertionError` when `organism` is not set by Zethson in https://github.com/laminlabs/bionty/pull/144
* ✨ Add field support for bionty base by Zethson in https://github.com/laminlabs/bionty/pull/146
* 📝 Fix keep docstring standardize gene by Zethson in https://github.com/laminlabs/bionty/pull/148
* 🎨 Rename import_from_source by Zethson in https://github.com/laminlabs/bionty/pull/150


**Full Changelog**: https://github.com/laminlabs/bionty/compare/0.52.0...0.52.1

Page 1 of 8

© 2025 Safety CLI Cybersecurity Inc. All Rights Reserved.