Callingcardstools

Removing all calls to pandas.DataFrame.append as it has been deprecated since v2.0 released in June 2023

**Full Changelog**: https://github.com/cmatKhan/callingCardsTools/compare/v1.1.0...v1.2.0

See [changelog](https://github.com/cmatKhan/callingCardsTools/blob/main/docs/home/changelog.md)

What's Changed
* V1.1.0 by cmatKhan in https://github.com/cmatKhan/callingCardsTools/pull/10


**Full Changelog**: https://github.com/cmatKhan/callingCardsTools/compare/v1.0.0...v1.1.0

This is the initial official release of CallingCardsTools. The documentation, API and cmd line tools are working.

updating based on currently working nf pipeline and database interaction

debug process aln

still debugging process aln