Careamics

What's Changed
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/93
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/95
* ci(dependabot): bump actions/setup-python from 4 to 5 by dependabot in https://github.com/CAREamics/careamics/pull/96
* Refactor BioImage.io Export/Import by jdeschamps in https://github.com/CAREamics/careamics/pull/97


**Full Changelog**: https://github.com/CAREamics/careamics/compare/v0.1.0rc1...v0.1.0rc2

What's Changed
* Packaging and new configuration by jdeschamps in https://github.com/CAREamics/careamics/pull/1
* Testing by jdeschamps in https://github.com/CAREamics/careamics/pull/3
* Dataloader testing by jdeschamps in https://github.com/CAREamics/careamics/pull/11
* Refactor configuration by jdeschamps in https://github.com/CAREamics/careamics/pull/20
* Rename project by jdeschamps in https://github.com/CAREamics/careamics/pull/21
* Cleaning by jdeschamps in https://github.com/CAREamics/careamics/pull/22
* Fix mypy and ruff by jdeschamps in https://github.com/CAREamics/careamics/pull/23
* Rename dataset by jdeschamps in https://github.com/CAREamics/careamics/pull/24
* Remove n2v2 clauses in unet by jdeschamps in https://github.com/CAREamics/careamics/pull/25
* Fix config tests by jdeschamps in https://github.com/CAREamics/careamics/pull/26
* Cleanup, TODOs and config by jdeschamps in https://github.com/CAREamics/careamics/pull/27
* New config example by jdeschamps in https://github.com/CAREamics/careamics/pull/28
* Add seed and cuda benchmark fixing by veegalinova in https://github.com/CAREamics/careamics/pull/29
* Refactor configuration by jdeschamps in https://github.com/CAREamics/careamics/pull/30
* Use Pydantic model validators by jdeschamps in https://github.com/CAREamics/careamics/pull/31
* WIP: dataset refactoring by veegalinova in https://github.com/CAREamics/careamics/pull/32
* Full configuration dump by jdeschamps in https://github.com/CAREamics/careamics/pull/34
* Add rich logging by veegalinova in https://github.com/CAREamics/careamics/pull/35
* Update ci.yml by jdeschamps in https://github.com/CAREamics/careamics/pull/38
* Fix py38 error by jdeschamps in https://github.com/CAREamics/careamics/pull/39
* removed zarr dataset until next milestone by CatEek in https://github.com/CAREamics/careamics/pull/43
* Wandb logging by veegalinova in https://github.com/CAREamics/careamics/pull/44
* Tooling by jdeschamps in https://github.com/CAREamics/careamics/pull/45
* Configuration entry point by jdeschamps in https://github.com/CAREamics/careamics/pull/48
* Validate models on assignment by jdeschamps in https://github.com/CAREamics/careamics/pull/49
* Fix ProgressBar Itervable vs Sequence by veegalinova in https://github.com/CAREamics/careamics/pull/52
* Ruff mypy fixes by CatEek in https://github.com/CAREamics/careamics/pull/50
* Update mypy by jdeschamps in https://github.com/CAREamics/careamics/pull/53
* Fix windows CI by jdeschamps in https://github.com/CAREamics/careamics/pull/51
* Add check for config parameter by jdeschamps in https://github.com/CAREamics/careamics/pull/56
* Reset rich live before training and prediction by veegalinova in https://github.com/CAREamics/careamics/pull/60
* Remove paths from configuration by jdeschamps in https://github.com/CAREamics/careamics/pull/59
* More tests by CatEek in https://github.com/CAREamics/careamics/pull/57
* Cleanup by CatEek in https://github.com/CAREamics/careamics/pull/63
* Bioimage export by mese79 in https://github.com/CAREamics/careamics/pull/62
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/65
* Readme update 0.1.0 by CatEek in https://github.com/CAREamics/careamics/pull/66
* Fix remaining mypy and ruff errors by jdeschamps in https://github.com/CAREamics/careamics/pull/68
* Add tests 45 by CatEek in https://github.com/CAREamics/careamics/pull/70
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/77
* API change proposal: remove prediction from configuration by jdeschamps in https://github.com/CAREamics/careamics/pull/78
* Global RNG generator by veegalinova in https://github.com/CAREamics/careamics/pull/67
* Prediction refactoring by CatEek in https://github.com/CAREamics/careamics/pull/76
* Rename to careamics by jdeschamps in https://github.com/CAREamics/careamics/pull/83
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/84
* Fix docs by jdeschamps in https://github.com/CAREamics/careamics/pull/85
* Github templates and publishing by jdeschamps in https://github.com/CAREamics/careamics/pull/90
* ci(dependabot): bump actions/checkout from 3 to 4 by dependabot in https://github.com/CAREamics/careamics/pull/91
* ci(dependabot): bump styfle/cancel-workflow-action from 0.11.0 to 0.12.0 by dependabot in https://github.com/CAREamics/careamics/pull/92

New Contributors
* jdeschamps made their first contribution in https://github.com/CAREamics/careamics/pull/1
* CatEek made their first contribution in https://github.com/CAREamics/careamics/pull/43
* mese79 made their first contribution in https://github.com/CAREamics/careamics/pull/62
* pre-commit-ci made their first contribution in https://github.com/CAREamics/careamics/pull/65
* dependabot made their first contribution in https://github.com/CAREamics/careamics/pull/91

**Full Changelog**: https://github.com/CAREamics/careamics/commits/v0.1.0rc1

What's Changed
* Eval utils fixes by CatEek in https://github.com/CAREamics/careamics/pull/393


**Full Changelog**: https://github.com/CAREamics/careamics/compare/v0.0.8...v0.0.9

What's Changed
* Adding grid_size parameter by CatEek in https://github.com/CAREamics/careamics/pull/392


**Full Changelog**: https://github.com/CAREamics/careamics/compare/v0.0.7...v0.0.8

What's Changed
* Feature: Sampling from noise model, noise model refactoring by veegalinova in https://github.com/CAREamics/careamics/pull/340
* Chore(deps): Update matplotlib requirement from <=3.9.0 to <=3.10.0 by dependabot in https://github.com/CAREamics/careamics/pull/357
* chore: Remove obsolete skips in tests by jdeschamps in https://github.com/CAREamics/careamics/pull/362
* feat: Add algorithm model validators by jdeschamps in https://github.com/CAREamics/careamics/pull/361
* Fix bug: noise model not training on GPU by veegalinova in https://github.com/CAREamics/careamics/pull/360
* feat: Improve Pydantic configuration discrimination by jdeschamps in https://github.com/CAREamics/careamics/pull/366
* Chore: Add zarr to list of dependapot ignores by melisande-c in https://github.com/CAREamics/careamics/pull/375
* Chore(deps): Update scikit-image requirement from <=0.25.0 to <=0.25.1 by dependabot in https://github.com/CAREamics/careamics/pull/376
* Chore(deps): Update torch requirement from <=2.5.1,>=2.0 to >=2.0,<=2.6.0 by dependabot in https://github.com/CAREamics/careamics/pull/382
* Chore(deps): Update torchvision requirement from <=0.20.1 to <=0.21.0 by dependabot in https://github.com/CAREamics/careamics/pull/383
* chore: Improve PR template by jdeschamps in https://github.com/CAREamics/careamics/pull/378
* MicroSplit submission by CatEek in https://github.com/CAREamics/careamics/pull/386
* Fix: Change tqdm import so it automatically detects whether it is rendering within a notebook by melisande-c in https://github.com/CAREamics/careamics/pull/390
* Feature: Add ability to set dataloader kwargs for validation dataset by melisande-c in https://github.com/CAREamics/careamics/pull/387


**Full Changelog**: https://github.com/CAREamics/careamics/compare/v0.0.6...v0.0.7

What's Changed
* Add code of conduct by jdeschamps in https://github.com/CAREamics/careamics/pull/330
* Chore(deps): Bump the python-packages group across 1 directory with 9 updates by dependabot in https://github.com/CAREamics/careamics/pull/329
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/286
* chore: Better constraints for typer by jdeschamps in https://github.com/CAREamics/careamics/pull/332
* chore: Set `ruff` compatibility check to `py39` by jdeschamps in https://github.com/CAREamics/careamics/pull/331
* Fix: Mismatch between NumPy version used in mypy pre-commit and package dependencies. by melisande-c in https://github.com/CAREamics/careamics/pull/341
* ci(pre-commit.ci): autoupdate by pre-commit-ci in https://github.com/CAREamics/careamics/pull/338
* Chore(deps): Update psutil requirement from <=6.1 to <=6.1.1 by dependabot in https://github.com/CAREamics/careamics/pull/335
* Chore(deps): Update pytorch-lightning requirement from <=2.4,>=2.2 to >=2.2,<=2.5.0.post0 by dependabot in https://github.com/CAREamics/careamics/pull/336
* Chore(deps): Update pillow requirement from <=11.0.0 to <=11.1.0 by dependabot in https://github.com/CAREamics/careamics/pull/337
* Chore(deps): Update tifffile requirement from <=2024.12.12 to <=2025.1.10 by dependabot in https://github.com/CAREamics/careamics/pull/351
* refac: Algorithm specific configurations by jdeschamps in https://github.com/CAREamics/careamics/pull/344


**Full Changelog**: https://github.com/CAREamics/careamics/compare/v0.0.5...v0.0.6