Cazy-webscraper

Latest version: v2.3.0.3

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2.2.5

Fix import error when retrieving protein sequences from NCBI, that was introduced in version 2.2.4

What's Changed
* Update imports by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/107


**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.4...v2.2.5

2.2.4

What's Changed
* Issue 99 by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/102

Fix Issue 99: Improve handling when incurring errors when retrieving data from NCBI

1. Separate invalid IDs to IDs that suffered to failed connections
2. Parse batches containing invalid IDs separately to and before failed connection batches

Downloaded protein sequences are cached to a FASTA file.

Updated information in the docs on caching.

**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.3...v2.2.4

2.2.3

Address issue 100 with failing to retrieve data from UniProt, owing to changes to the UniProt API.

All alters the methods for mapping UniProt accessions to GenBank accessions - including a more robust method for assigning data from UniProt to the correct protein in the local CAZyme database.

What's Changed
* Issue 100 uniprot by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/103


**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.2...v2.2.3

2.2.2

* Update closing message information
* Update documentation
* Update third party citations
* Increases unit test coverage

What's Changed
* Update closing message by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/98


**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.1...v2.2.2

2.2.1

Fix inability to parse Entrez.NotXMLError when retrieving protein sequences from NCBI.

What's Changed
* Fix inability to parse Entrez.NotXMLError by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/96


**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.2.0...v2.2.1

2.2.0

What's Changed
* Add getting GTDB taxonomic classifications by HobnobMancer in https://github.com/HobnobMancer/cazy_webscraper/pull/94


**Full Changelog**: https://github.com/HobnobMancer/cazy_webscraper/compare/v2.0.13.1...v2.2.0

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