Major changes:
- ``GaussianFile``'s ``molecules`` attribute can now be either ``Ensemble`` or ``ConformationalEnsemble``, depending on if the individual molecules are compatible or not.
- Multiple structures can now be written to the same file using Link1 syntax with the ``GaussianFile.write_ensemble_to_file()`` command.
- ``Molecule`` ``atomic_numbers`` and ``geometries`` are now indexed from 1 **internally** using a custom subclass of ``numpy.ndarray`` called ``cctk.OneIndexedArray``.
Minor changes:
- Two new tutorials have been added.
- More preloaded groups have been added (Cl, Br, F, I, SF5, SO3H).