Cellfinder

What's Changed
* Replaced NIU upload action with separate steps by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/478
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/480
* Use pypa/gh-action-pypi-publish stable release v1 by lochhh in https://github.com/brainglobe/cellfinder/pull/481
* Use explicit len(arr)-count instead of just -count to handle count=0 by matham in https://github.com/brainglobe/cellfinder/pull/484

New Contributors
* lochhh made their first contribution in https://github.com/brainglobe/cellfinder/pull/481

**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.4.0...v1.4.1

What's Changed
* Move detection (2d/3d filtering, structure splitting) to PyTorch by matham in https://github.com/brainglobe/cellfinder/pull/440
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/467
* Notify slack on scheduled test failure by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/469
* ensure trained_model is a Path before calling .suffix by alessandrofelder in https://github.com/brainglobe/cellfinder/pull/471
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/472
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/474
* Unpin keras by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/475
* bump headless display action 2->3 by alessandrofelder in https://github.com/brainglobe/cellfinder/pull/476


**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.3.3...v1.4.0

What's Changed
* Move detection (2d/3d filtering, structure splitting) to PyTorch by matham in https://github.com/brainglobe/cellfinder/pull/440


**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.3.3...v1.4.0alpha0

What's Changed
* Unpin numpy by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/452
* Remove x86 macOS runners from the test suite by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/453
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/455
* Unpin numpy by adamltyson in https://github.com/brainglobe/cellfinder/pull/457
* Schedule weekly tests by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/458
* Pin `keras` version to 3.5.0 by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/462
* Allow napari GUI to accept custom weights by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/460
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/461


**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.3.2...v1.3.3

What's Changed
* Conform to new linting rules by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/447
* temporarily depend on numpy<2 by alessandrofelder in https://github.com/brainglobe/cellfinder/pull/448
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/445


**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.3.1...v1.3.2

What's Changed
* Update supported Python versions by adamltyson in https://github.com/brainglobe/cellfinder/pull/436
* Add citation to readme by adamltyson in https://github.com/brainglobe/cellfinder/pull/438
* Prevent zero underflow in volume by matham in https://github.com/brainglobe/cellfinder/pull/437
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/brainglobe/cellfinder/pull/441
* Standardise contact information in readme by adamltyson in https://github.com/brainglobe/cellfinder/pull/442
* Added xfail to tests that fail due to logging bug by IgorTatarnikov in https://github.com/brainglobe/cellfinder/pull/444


**Full Changelog**: https://github.com/brainglobe/cellfinder/compare/v1.3.0...v1.3.1