Celltypist

Latest version: v1.6.3

Safety actively analyzes 688803 Python packages for vulnerabilities to keep your Python projects secure.

Scan your dependencies

Page 1 of 3

1.6.3

- GPU support based on rapids-singlecell during the over-clustering step [110](https://github.com/Teichlab/celltypist/issues/110)
- Load custom model directly [60](https://github.com/Teichlab/celltypist/issues/60)

1.6.2

- Reformat error and warning messages during prediction [89](https://github.com/Teichlab/celltypist/issues/89)
- Fix cuml import during model training
- Fix categorical output from new versions of pandas during majority voting [96](https://github.com/Teichlab/celltypist/issues/96)

1.6.1

- Add cuML-based GPU support for model training [80](https://github.com/Teichlab/celltypist/pull/80)
- Detect data input format only for the first 1000 cells
- Fix KeyError in [to_adata](https://celltypist.readthedocs.io/en/latest/celltypist.classifier.AnnotationResult.html#celltypist.classifier.AnnotationResult.to_adata) when setting `mode = 'prob match'` in [celltypist.annotate](https://celltypist.readthedocs.io/en/latest/celltypist.annotate.html)
- Add gene symbol to ID conversion file and expand README [87](https://github.com/Teichlab/celltypist/issues/87)

1.6.0

- Separate [CellHint](https://github.com/Teichlab/cellhint) from CellTypist
- Keep strict one-to-one orthologs during species model conversion
- Auto-fetch feature transfer files for model conversion
- Adapt code to sklearn>=1.3.0 [75](https://github.com/Teichlab/celltypist/issues/75)

1.5.3

- Fix DistanceMetric import for sklearn >= 1.3.0 [73](https://github.com/Teichlab/celltypist/issues/73)
- Detect input format for [celltypist.dotplot](https://celltypist.readthedocs.io/en/latest/celltypist.dotplot.html)
- Require leidenalg >= 0.9.0

1.5.2

- Patch log1p serialization issue and model download error

Page 1 of 3

© 2024 Safety CLI Cybersecurity Inc. All Rights Reserved.