Cemba-data

Latest version: v1.6.9

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1.3.3

Updated m3C codes for consistency with Jingtian's best practice

1.3.0

New `yap mc-bulk` pipeline, which helps to generate snakefile that can merge single-cell ALLCs and generate bigwig files based on clustering results. See doc [here](https://hq-1.gitbook.io/mc/pseudo-bulk/methylome-pseudo-bulk)

1.2.0

1. Add plots in mapping summary
2. Trim more adapters for mCT pipeline
3. make-samplesheet generate two versions of novaseq sample sheet

1.1.0

- support start mapping from cell-level FASTQ
- fixed several bugs

1.0.0

- Fully support demultiplex, mapping, and summary of all kinds of snmC-seq based technologies.
- Settled on using snakemake as the internal pipeline manager of all the commands
- Support execution on both gale Qsub and stampede2 Sbatch grid engine.

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