Updated m3C codes for consistency with Jingtian's best practice
1.3.0
New `yap mc-bulk` pipeline, which helps to generate snakefile that can merge single-cell ALLCs and generate bigwig files based on clustering results. See doc [here](https://hq-1.gitbook.io/mc/pseudo-bulk/methylome-pseudo-bulk)
1.2.0
1. Add plots in mapping summary 2. Trim more adapters for mCT pipeline 3. make-samplesheet generate two versions of novaseq sample sheet
1.1.0
- support start mapping from cell-level FASTQ - fixed several bugs
1.0.0
- Fully support demultiplex, mapping, and summary of all kinds of snmC-seq based technologies. - Settled on using snakemake as the internal pipeline manager of all the commands - Support execution on both gale Qsub and stampede2 Sbatch grid engine.