Chmutil

Latest version: v0.8.4

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0.8.4

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* Try number two to get comet configuration to load singularity 2.3.2.
See issue 76 below.

0.8.3

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* Added --dontdeletescratch option to createtrainingmrcstack.py to skip
deletion of scratchdir.
`Issue 78 <https://github.com/CRBS/chmutil/issues/78>`_

* Updated comet configuration to load singularity 2.3.2.
`Issue 76 <https://github.com/CRBS/chmutil/issues/76>`_

0.8.2

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* Fixed typo in history notes which caused pypi not to render project description properly

0.8.1

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* Fixed bug in createtrainingmrcstack.py which caused program to fail due
to incorrect call to get_image_path_list().
`Issue 48 <https://github.com/CRBS/chmutil/issues/48>`_

* Increased required memory for merge tasks on Rocce cluster from 10 to
20 gigabytes of ram and added virtual_free constraint to handle
gigapixel images.
`Issue 49 <https://github.com/CRBS/chmutil/issues/49>`_

0.8.0

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* Added --gentifs to createchmjob.py to generate tif probability map images
`Issue 43 <https://github.com/CRBS/chmutil/issues/43>`_

* Fixed bug in checkchmjob.py --detailed where ram value was incorrect
`Issue 44 <https://github.com/CRBS/chmutil/issues/44>`_

* Added information about input images to checkchmjob.py --detailed
`Issue 28 <https://github.com/CRBS/chmutil/issues/28>`_

0.7.0

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* Added --gentiles flag to createchmimage.py to generate tiles from
image that can be viewed in probability map viewer.
`Issue 42 <https://github.com/CRBS/chmutil/issues/42>`_

* Added --rawthreshold flag to createprobmapoverlay.py which
lets caller specify exact pixel intensity value instead of
percentage as offered with --threshpc.
`Issue 41 <https://github.com/CRBS/chmutil/issues/41>`_

* Added virtual_free to requirements for SGE jobs submitted
by createchmtrainjob.py to rocce cluster.
`Issue 40 <https://github.com/CRBS/chmutil/issues/40>`_

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