Darwin-py

Latest version: v1.1.3

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1.0.4

Not secure
What's Changed
* Bump the python-requirements group across 1 directory with 15 updates by dependabot in https://github.com/v7labs/darwin-py/pull/894
* Bump zipp from 3.18.1 to 3.19.1 by dependabot in https://github.com/v7labs/darwin-py/pull/883
* Bump certifi from 2024.2.2 to 2024.7.4 by dependabot in https://github.com/v7labs/darwin-py/pull/882
* [DAR-2981][External] Catch & handle blocking errors / non-blocking warnings when importing annotations to slots by JBWilkie in https://github.com/v7labs/darwin-py/pull/896
* [DAR-3424][External] Added `Dockerfile` by JBWilkie in https://github.com/v7labs/darwin-py/pull/898
* Version bump to 1.0.4 by JBWilkie in https://github.com/v7labs/darwin-py/pull/899


**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v1.0.3...v1.0.4

1.0.3

Not secure
What's Changed
* [DAR-3111][External] CLI-controllable legacy NifTI import behaviour by JBWilkie in https://github.com/v7labs/darwin-py/pull/889
* [DAR-2991][External] Set CLI to pull with folders by default & display overwrite warning by JBWilkie in https://github.com/v7labs/darwin-py/pull/887
* Version bump to 1.0.3 by JBWilkie in https://github.com/v7labs/darwin-py/pull/890


**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v1.0.2...v1.0.3

1.0.2

Not secure
What's Changed
* [DAR-2785][External] Improved test coverage of `import_annotations()` by JBWilkie in https://github.com/v7labs/darwin-py/pull/885
* [DAR-2996][External] Fixed `remove_extra` logic and added removal of empty directories by JBWilkie in https://github.com/v7labs/darwin-py/pull/886
* [DAR-2347][DAR-2768][Internal] Add option for isotropic transform on annotations by shernshiou in https://github.com/v7labs/darwin-py/pull/864
* [DAR-2707][External] Allow repeated polling of pending export releases by JBWilkie in https://github.com/v7labs/darwin-py/pull/876
* [DAR-2463][External] Adjusted maximum number of items that can be registered in a single request by JBWilkie in https://github.com/v7labs/darwin-py/pull/857
* Housekeeping: Version bump to 1.0.2 by JBWilkie in https://github.com/v7labs/darwin-py/pull/888


**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v1.0.1...v1.0.2

1.0.1

Not secure
What's Changed
* [DAR-2110][External] Fixed multiprocessing annotation parsing issue with console by JBWilkie in https://github.com/v7labs/darwin-py/pull/875
* [DAR-2660][External] Pinned dependency major versions by JBWilkie in https://github.com/v7labs/darwin-py/pull/874
* [DAR-2739][External] Add `.mkv`, `.hevc`, `.qtiff` and `.rvg` as supported extensions by JBWilkie in https://github.com/v7labs/darwin-py/pull/877
* [DAR-2045][External] Multi-threaded annotation imports by JBWilkie in https://github.com/v7labs/darwin-py/pull/880
* Version bump to v1.0.1 by JBWilkie in https://github.com/v7labs/darwin-py/pull/881


**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v1.0.0...v1.0.1

1.0.0

Not secure
What's Changed
* [DAR-2469][External] Fixed opencv version to 4.10.0.82 by JBWilkie in https://github.com/v7labs/darwin-py/pull/871
* [DAR-2640][External] Lock tenacity to 8.3.0 by JBWilkie in https://github.com/v7labs/darwin-py/pull/869
* Bump urllib3 from 2.2.1 to 2.2.2 by dependabot in https://github.com/v7labs/darwin-py/pull/870
* [DAR-2606][External] Strip leading & trailing whitespaces from class names when reading Darwin JSON annotations by JBWilkie in https://github.com/v7labs/darwin-py/pull/866
* Housekeeping: Version bump to v1.0.0 by JBWilkie in https://github.com/v7labs/darwin-py/pull/873

BREAKING CHANGES
* [DAR-2246][External] Unify darwin-py naming convention by JBWilkie in https://github.com/v7labs/darwin-py/pull/868
* [DAR-2639][External] Add data & tests for in-platform model training by JBWilkie in https://github.com/v7labs/darwin-py/pull/872

Previous versions used a non-unified combination of `item_name` and `source_name` when saving and loading files. In an effort to unify our approach to local files when pulling releases and loading files, this version makes the following changes:

1. All exports will be exported in folders mirroring the data structure of the dataset by default (previously a flat structure was the default)
2. The `item_name` in the JSON export will always be used as a default to save and read files with three notable exceptions:
- **Downloading video files as individual video frames:** Each video will result in a folder named after the `item_name`, containing individual frames named after the frame number in the frame index
- **Downloading multi-slotted items:** Multi-slotted items have one item name (for the overall item) but potentially many `source_name`s (for the component files that make up the item). This will result in a folder named after the `item_name`, containing one file for each slot named after the source name
- **Downloading a slotted item consisting of multiple concatenated DICOM slices**: These items can contain multiple source files in a single slot. Each item will result in a folder named after the `item_name`, containing one file for each slice named after the `source name`

**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v0.8.62...v1.0.0

0.8.62

Not secure
What's Changed
* Bump the github-actions group with 2 updates by dependabot in https://github.com/v7labs/darwin-py/pull/821
* Cleanup of mypy for darwin future by Nathanjp91 in https://github.com/v7labs/darwin-py/pull/757
* [DAR-2487][External] Fixed long-standing ruff linter issues by JBWilkie in https://github.com/v7labs/darwin-py/pull/859
* [DAR-2528][External] Fixed issue installing scipy by JBWilkie in https://github.com/v7labs/darwin-py/pull/861
* Revert "Bump the github-actions group with 2 updates" by JBWilkie in https://github.com/v7labs/darwin-py/pull/862
* [DAR-2504][External] Generate empty NifTI volumes when no polygons are present by JBWilkie in https://github.com/v7labs/darwin-py/pull/863
* [DAR-2161][External] Exponential backoff for external storage registration by JBWilkie in https://github.com/v7labs/darwin-py/pull/856
* Housekeeping: Version bump to v0.8.62 by JBWilkie in https://github.com/v7labs/darwin-py/pull/865


**Full Changelog**: https://github.com/v7labs/darwin-py/compare/v0.8.61...v0.8.62

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