Deepbgc

Latest version: v0.1.31

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0.1.18

0.1.17

- You can now detect BGCs in a *protein* FASTA sequence using `deepbgc pipeline --protein`. This is done by creating an artificial sequence where all proteins are found right after another on the + strand
- You can now prepare *protein* FASTA sequences into a Pfam TSV file using `deepbgc prepare --protein`.
- Fixed ROC and Precision-Recall plots

0.1.16

- add `--prodigal-meta-mode` argument to `deepbgc prepare` and `deepbgc pipeline` to enable detecting genes in short contigs
- fix Python 2.7 incompatibility error when detecting Pfam domains

0.1.14

- Added support for gzipped input sequence files (should end with .gz extension)
- Improved error message when parsing unknown format

0.1.13

- Require Tensorflow < 2.0.0

0.1.12

- Removed forgotten command that printed out all pfam descriptions to STDOUT

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