Deeponto

Fixing edge-case issues for BERTMap and minor bugs for ontology alignment evaluation metrics.

New features for ontology projection and normalisation are now available. The relevant code is modified from the mOWL library: https://mowl.readthedocs.io/en/latest/.

For more flexibility of importing Java dependencies, we migrated the gradle files from mOWL into DeepOnto and used them for **direct Java dependency building**. As a result, mOWL is **removed** from the pip dependency.

The major update of this release is the deployment of the BERTSubs system, available at `deeponto.subs.bertsubs`. Besides, we move the pruning functionality out of `Ontology` to form a separate module for future development. See more details at [changelog](https://github.com/KRR-Oxford/DeepOnto/blob/main/docs/changelog.md).

This update is mainly about the base class `deeponto.onto.Ontology` where more OWLAPI features are encapsulated into handy functions (see [changelog](https://krr-oxford.github.io/DeepOnto/changelog/)).

Officially release the ontology verbaliser module at `deeponto.onto.verbalisation`.

Fully deploy `deeponto.lama` referring to the paper: [Language Model Analysis for Ontology Subsumption Inference](https://arxiv.org/abs/2302.06761). The current version of the paper has not covered the information about the new verbaliser, it will be updated soon.