- better handling of genes with CDS lacking start or end codons - faster reverse complement - handle transcripts without CDS
0.9.9
- fixed bug reassigning genomic sequence for transcripts on reverse strand
0.9.8
- fix flipping allele strand bug for genes on -ve strand - fix bug when GTF coords are single digit
0.9.6
- fixed bug picking the longest transcript containing the most de novos - avoid errors with genes lacking suitable protein coding transcripts
0.9.5
- various speedups to Transcripts, and checking their consequence - fixed bug when loading genes with problematic transcripts
0.9.2
sped up the clustering test by making geometric mean slightly faster, and using a more optimal weighted sampling function call which only returns the site position.