Auto apply optimisation suggestion
At the end of a analysis BEAST provides suggestions for optimising operators e.g. Try setting scaleFactor to about 0.96. A path to the output file can be provided to the --optimise flag and the suggestions will automatically be extracted and applied to the generated dynamic XML file.
bash
dynamic-beast --optimise hcv_coal.out --outfile dynamic_hcv_coal.xml hcv_coal.xml