Dysgu

Improvements:

- Added `--low-mem` option that can reduce memory requirements
- Support for single-end short reads (compatible with paired-end model)

Bug fixes:

- `CHR2_POS` now reported for translocations

Download source code using the dysgu.tar.bz2 link below, otherwise htslib will be missing.

Improvements:

- Better inversion calling for long-reads

- Better merging of small variants

- dysgu call can be used for short reads to save disk space

Bug fixes:

- --sites option now works with multiprocessing
- Fixed ZeroDivisionError for `clip_qual_ratio`
- Fixed ValueError for REP/REPSC

Download source code using the dysgu.tar.bz2 link below, otherwise htslib will be missing.