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+ Improved performance by:
+ Slight rewrites in the multiple FASTQ pipeline. Cases with one, two, three
and multiple FASTQ files are now handled separately. This vastly improves
the speed of especially the single and paired end instances.
+ Rewriting the filters in C.
+ Added logging with basic stats. When ``--verbose`` is set, the counts for
individual filters are reported. With ``--quiet`` logging can be turned off.