Fusion-tools

Features:
- FeatureExtraction functionality added with parallelization (non-interactive)


v0.0.12->v0.0.21 (10/07/2024)

Fix:
- External testing performed, restructuring of package and setup in response to errors encountered

Features:
- Support for Jupyter Notebook visualization (excluding JupyterHub hosted over HTTPS)

Fix:
- Fixed adding/deleting manual ROIs (keeping _id property)

Features:
- Create new annotation layers based off of selected filters in `OverlayOptions`
- Apply labels to properties in `BulkLabels`
- Adding `process_filter_queries` to `shapes` for external access. Allows users to pass a list of spatial and property queries to a GeoJSON and returns a unified FeatureCollection
- Select different colormaps in `OverlayOptions` under "Advanced Overlay Options". This includes all colormaps detailed [here](https://colorbrewer2.org/#type=sequential&scheme=BuGn&n=3)

Fix:
- Fixing callbacks initialization for MultiFrameSlideMap
- Fixing dropdown menus for PropertyViewer with >2 levels of nested properties (now works with arbitrary levels)

Features
- Switching from in-memory GeoJSON to geobuf for added efficiency with >10k structures
- Manual ROIs now able to be used individually as opposed to as members of one single FeatureCollection

Fix
- Fixing spatial aggregation function for nested properties

Features
- Adding segmentation, annotation, and bulk labeling functionality

Fix
- Pre-initializing pattern-matching indices for MultiFrameSlideMap base and tile layers
- Fixing dimensions of HRAViewer when added to a column

Features
- Update markers on the map by selecting data points in a sub-plot in PropertyPlotter
- Now accepting an arbitrary number of levels in nested sub-properties (use the property_depth argument to adjust +/- 4 levels)
- SlideImageOverlay components added alongside GeoJSON annotations. Allows users to overlay images at specific locations or move that image around to find the aligned coordinates.

Features
- Added functionality for selected points in PropertyPlotter
- Added HRAViewer ASCT+B table views for all organs in 7th release