Highdicom

Bug fixes

- Fix computation of plane positions for images with Dimension Organization TILED_FULL and more than one optical path (158)

Bug fixes

* Use correct color space for encoding of frames with JPEG baseline 8-bit transfer syntax (157)
* Remove superfluous file meta information attributes (156)

Enhancements

- Warn in case of a malformed person name instead of raising an errors (154)
- Simplify description of specimen preparation steps (153)

Bug fixes

* Convert color space upon decoding of JPEG compressed color image frames (152)

Breaking changes

* Deprecate `processing_type` parameter of constructor of `highdicom.SpecimenPreparationStep` (see [section in release notes](https://highdicom.readthedocs.io/en/latest/release_notes.html#deprecation-of-processing-type-parameter) for further details)

Bug fixes

- Fix name of utility function parameter (149)

Bug fixes

- Account for non-tiled images with slide-based coordinate system (146)
- Fix mapping of image and reference coordinates (146)

New features

- Add method to get all graphic data of an annotation group (147)

Breaking changes

- Parameters of`highdicom.spatial.map_pixel_into_coordinate_system` changed from `coordinate: Sequence[float]` to `index: Sequence[int]`
- Return value of `highdicom.spatial.map_coordinate_into_pixel_matrix` changed from `Tuple[float, float, float]` to `Tuple[int, int, int]`

For further information on these changes, please refer to the corresponding [section in the release notes ](https://highdicom.readthedocs.io/en/latest/release_notes.html#correct-coordinate-mapping).

New features

* Add support for JPEG-LS encoding/decoding (142)