Hippunfold

Latest version: v0.5.11

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0.5.11

- new unfold templates with variable density
- included DG in template shape injection
- updated documentation
- Dice qc (76)
- added cropseg modality type
- update input for shape inject, target rules
- added space wildcard for giftis
- allow autotop to run with no initialization
- added --hemi option
- fix nan vertices in output surfaces (90)
- fast laplace via initialization (88)

0.5.1

- fixes bug in ITK warps
- pins numpy version in setup.py (was installing older version in some venvs)

0.5.0

- first release without matlab/mcr dependencies
- reduces container size and runtime considerably
- pypi deployment

0.4.2

- fixes cifti structure error in spec files
- adds `--archive_work` option to tar work folders upon completion
- updates to docs
- adds more QC images

0.4.1

- fixes problem with missing ComposeMultiTransform dependency in docker container

0.4.0

Now uses Snakebids v0.3.9, which provides the `--path` option to specify inputs with wildcards, so a BIDS dataset is not actually needed if all inputs specified.

Various other feature additions and fixes:

- visualization qc reports 32
- updates to docs, model hosting on zenodo, CI 29
- provides composite warps from T1w to unfold 36 44
- added deps for report generation 37
- fixes to manual seg workflow 34 51
- added longitudinal test case 47
- upgrade to use snakebids v0.3.9 49
- added hippdwi b500 workflow 38
- added CIFTI outputs, fixed invalid structure for left 41

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