Htseq

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0.11.4

==============
2020-03-30

Fix a bug with Python3 and no-quality BAM/SAM files.

0.11.3

==============
2020-03-01

Updates in the documentation and new wheels to fix installation bugs.

0.11.2

==============
2019-01-07

Bugfix release for ``htseq-count``:

- fixed bug and changed how to use output SAM files via ``-o``: you now have
to specify the option once per input/output file

0.11.1

==============
2019-01-03

Bugfix release for ``htseq-count``:

- fixed bug and changed how to use of additional attributes via ``--additional-attr``

0.11.0

==============
2018-08-01

- ``htseq-count`` ignores secondary and supplementary alignments by default
- bugfix in the SAM output of ``htseq-count``
- optional argument name in reverse complement function
- better linting of Cython files

0.10.0

==============
2018-05-08

- flush output of ``htseq-count`` (thanks dcroote)
- pass memmap_dir to ChromVector.create (thanks wkopp)
- ``BAM_Reader`` supports ``check_sq`` for PacBio reads (thanks jbloom)
- a number of Bugfixes

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