Hyfi

Fix

* **config:** Update set_project_root and set_project_name methods ([`7b3849d`](https://github.com/entelecheia/hyfi/commit/7b3849dd42a18b36057a7d9d4f9bbd49124f3503))
* **task:** Refactor TaskPathConfig class implementation ([`a5b97a3`](https://github.com/entelecheia/hyfi/commit/a5b97a3a410e8a93f4651f1d6655aa0a98c22eb3))
* **dirnames:** Add config file options ([`fc11db7`](https://github.com/entelecheia/hyfi/commit/fc11db78893373b1fe0f4333f259b755713e65c0))
* **path:** Refactor base path configuration ([`ee4d39f`](https://github.com/entelecheia/hyfi/commit/ee4d39f8f6bd33fb60fdce4b3d2084b065e2ac02))
* **path:** Add project_name property ([`dc7162f`](https://github.com/entelecheia/hyfi/commit/dc7162fa099f0be771efcbbecc0e7a3c74a72546))
* **config:** Add reusable config file ([`205cffa`](https://github.com/entelecheia/hyfi/commit/205cffa5871a95a97129991c6f37b09311e4cbbb))
* **batch:** Move config_dir to the correct position ([`76e5001`](https://github.com/entelecheia/hyfi/commit/76e500104286b9a99f7562039b85bbc1d1a61fb6))
* **dependencies:** Upgrade joblib to ^1.3.1 ([`ee8bfbb`](https://github.com/entelecheia/hyfi/commit/ee8bfbb662e13ccf254ab7e178579a9f4f06df40))

Fix

* **tests:** Fix batch task configuration ([`16acf17`](https://github.com/entelecheia/hyfi/commit/16acf173f75200170b49ba17739c77d3b00f2331))
* **batch:** Improve config handling ([`ec03733`](https://github.com/entelecheia/hyfi/commit/ec037333789dab1bbd7a59f807a0b5ebbbf4a6c2))
* **BaseConfig:** Add subconfig initialization ([`6e84c4e`](https://github.com/entelecheia/hyfi/commit/6e84c4e69acea6fa8cf04dc65eac2bfa554515e5))

Fix

* **joblib:** Optimize test_batcher.py ([`d15c426`](https://github.com/entelecheia/hyfi/commit/d15c42663ae75a6adc660831e1457b80c8fa5e69))
* **batcher:** Fix logging formatting ([`484c06b`](https://github.com/entelecheia/hyfi/commit/484c06b30c51fc150b480adb342da9345c63cbfa))
* **config:** Remove unnecessary configuration options in JobLibConfig ([`48050a7`](https://github.com/entelecheia/hyfi/commit/48050a7fc57fe5fb954db955b8c0b023175c7e52))
* **joblib:** Update configuration settings ([`5c4a6a1`](https://github.com/entelecheia/hyfi/commit/5c4a6a120e7adff41926b43057bf0e8a53e7db63))

Fix

* **workflow:** Fix task configuration parsing ([`20a582c`](https://github.com/entelecheia/hyfi/commit/20a582c1d77ac63a630b1dd8c43697ce5d491d6b))
* **pipeline:** Improve pipeline configuration handling ([`af30e4d`](https://github.com/entelecheia/hyfi/commit/af30e4d6603db4951d124a9481037abea25462e2))
* **dotenv:** Update check_and_set_values method ([`7a94d24`](https://github.com/entelecheia/hyfi/commit/7a94d2487c5fabc8b22efdeae99edda29819b37d))

Feature

* **task:** Add task dirnames config ([`7c486e4`](https://github.com/entelecheia/hyfi/commit/7c486e4be2108d0c0ce64cc0a4e94a446a128358))
* **path:** Add DirnamesConfig class and default directory names ([`59b312f`](https://github.com/entelecheia/hyfi/commit/59b312f72212963b750fca4da9f23d3eae12d233))
* **path:** Add directory names configuration file ([`274e841`](https://github.com/entelecheia/hyfi/commit/274e84173f030c2ec02ac65b40d4cc7ccf88c989))
* **dependencies:** Update pydantic to version 2.0.0 ([`964c2ef`](https://github.com/entelecheia/hyfi/commit/964c2ef729090985e4441a13545967ba2a50d42f))

Fix

* **joblib:** Fix stopping distributed framework ([`8825996`](https://github.com/entelecheia/hyfi/commit/882599651a486bd88c7a526e99fc04a8a0e8d00c))
* **config:** Improve model data validation ([`b774d25`](https://github.com/entelecheia/hyfi/commit/b774d25253b928e715ec7939eefaf06b3340e29e))
* **composer:** Update XC.instantiate method ([`3a08f99`](https://github.com/entelecheia/hyfi/commit/3a08f9984ec1843853198f564f813e8feaea168e))
* **hyfi-composer:** Fix retrieving package source ([`33b5037`](https://github.com/entelecheia/hyfi/commit/33b5037315300f179c7a16ccf4c193c28d6c5854))
* **docs:** Update variable names in examples ([`43d04eb`](https://github.com/entelecheia/hyfi/commit/43d04eb8dbdcd26219a8f7ce7c9450d5786b8df5))

Breaking

* support pydantic v2 ([`964c2ef`](https://github.com/entelecheia/hyfi/commit/964c2ef729090985e4441a13545967ba2a50d42f))

Documentation

* **task:** Add batch functionality ([`d687528`](https://github.com/entelecheia/hyfi/commit/d687528426682bbb2a34ac5c831fada4c472508d))
* **task:** Add hyfi.task documentation ([`5c435fe`](https://github.com/entelecheia/hyfi/commit/5c435fee0ea0726510335c5f175c324d75263c79))
* **task:** Add batch documentation ([`cf613c9`](https://github.com/entelecheia/hyfi/commit/cf613c9e20294fcdd5f1ae44900470f985d6c509))
* **docs:** Add project reference page ([`cb1487f`](https://github.com/entelecheia/hyfi/commit/cb1487fdc589dd311e694e9d4a0a17fe7388c9e2))
* **pipeline:** Add configs ([`0944da5`](https://github.com/entelecheia/hyfi/commit/0944da503e45a48187c8447da043bdca40cd2dac))
* **module:** Add hyfi.module documentation ([`fb3d6b2`](https://github.com/entelecheia/hyfi/commit/fb3d6b2c04b3d4d82dc766bef863784b29f76272))
* **graphics:** Add hyfi.graphics documentation ([`4e8b54d`](https://github.com/entelecheia/hyfi/commit/4e8b54d13315b980c83792680943ef8ed3e883ce))
* **pipeline:** Add config documentation ([`ca0653b`](https://github.com/entelecheia/hyfi/commit/ca0653bf8a1d1ef587c2ec3c0795636ac02d86c4))
* Create `hyfi.pipe` reference documentation ([`71575c3`](https://github.com/entelecheia/hyfi/commit/71575c3c8d634c8c2e9deff643a2f421bcca4a46))
* **dotenv:** Add configuration class for environment variables in HyFI ([`f5493ba`](https://github.com/entelecheia/hyfi/commit/f5493ba01d1767002608ec59c3a40d64ee05b707))
* **copier:** Add copier documentation ([`0bca38d`](https://github.com/entelecheia/hyfi/commit/0bca38d24590cf50fe37ba50453723e14e11c552))
* **batch:** Add hyfi.batch documentation ([`b75dd3f`](https://github.com/entelecheia/hyfi/commit/b75dd3f0786ea8a46767c9e85381318bb8bb50a5))
* **utils:** Update docstrings ([`cac53f8`](https://github.com/entelecheia/hyfi/commit/cac53f83410443ca21f5dd0dea56e263321c6c46))
* **joblib:** Add batcher documentation ([`8d74675`](https://github.com/entelecheia/hyfi/commit/8d74675daab763a11f3df8a95036994656e5cdcf))
* **joblib.batch:** Add apply function ([`9c29ef6`](https://github.com/entelecheia/hyfi/commit/9c29ef60ecadc512d80684e28f5ed43ea261b028))
* **hyfi.joblib.batch:** Add apply_batch method ([`6f17119`](https://github.com/entelecheia/hyfi/commit/6f17119de614b049f36316bef7c81f971ebd3681))
* **joblib:** Add documentation for hyfi.joblib ([`d955315`](https://github.com/entelecheia/hyfi/commit/d955315378bcb963b91ff65ceff8db0c4af8c6f5))

Fix

* **composer): Fix type annotations in update method; fix(composer:** Return filepath as string in save_config_as_json method ([`7bb3849`](https://github.com/entelecheia/hyfi/commit/7bb3849327db551f46eac2c5ff5acaeb4672b245))
* **utils:** Fix lower_case_with_underscores function ([`56ea30b`](https://github.com/entelecheia/hyfi/commit/56ea30b86c4d3faf6d9366e65f40b8c83ec84da2))

Documentation

* **composer:** Update docstring in BaseConfig ([`5106221`](https://github.com/entelecheia/hyfi/commit/5106221ffcbbc02e20e6f9d397e45827e0c0a40e))