Ibridges

Improve transfer of single large files.

API:
- Move data objects and collections, aka rename
- Improve connection checks
- Rework the API
- Bugfix in search
- Examples in docstrings

CLI:
- Adding mkcoll and tree

Update tutorials

What's Changed
* 0.2.0 by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/181


**Full Changelog**: https://github.com/UtrechtUniversity/iBridges/compare/v0.1.6...v0.2.0

- Cli: add mkcoll
- API: make network check available as function
- Pipeline: dependabot

- Switch Integration tests to iRODS 4.3.2
- iRODS resources: skip bundleResc
- iRODS rules: allow to call microservices and rules on the server directly
- Bugfix for path issues in the python-irodsclient
- Data Transfers:
- By default create empty folder and collections during up and downloads even if the source is empty
- CLI: More options to define iRODS paths
- `ips` on the iRODS server will now show `ibridges` instead of the python API

What's Changed
* Skip bundleResc in listing of resources by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/119
* Fix ibridges output for `ibridges --version` by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/120
* generalizing rules by wurDevTim in https://github.com/UtrechtUniversity/iBridges/pull/113
* Remove kw_ALL from obj_put by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/124
* Convert LoginError to PasswordError by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/122
* Temporary fix for 126 by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/127
* Empty folders and collections by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/128
* Add iRODS app name to check with ips by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/130
* Support url-like behavior by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/131
* Create new release. by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/133


**Full Changelog**: https://github.com/UtrechtUniversity/iBridges/compare/v0.1.4...v0.1.5

Adding a commandline interface to the package.

What's Changed
* Python package uses latest PRC version by wurDevTim in https://github.com/UtrechtUniversity/iBridges/pull/108
* Reset CI/CD pipeline to do linting on all python versions by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/110
* Add user info to session, bugfix in session by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/114
* Add CLI to ibridges for sync/upload/download/init by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/109
* Adjust test setup with second resource for CLI by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/116

New Contributors
* wurDevTim made their first contribution in https://github.com/UtrechtUniversity/iBridges/pull/108

**Full Changelog**: https://github.com/UtrechtUniversity/iBridges/compare/v0.1.3...v0.1.4

- Bug fixes:
- checksum bug in sync_data
- README: bug in iRODS connection
- Quickstart tutuorial

- New feature: *Export metadata*
- Upload/Download: Introduce flag to turn exceptions into warnings when uploading collecions and folders

What's Changed
* Fix capitalization of tutorials by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/70
* Expand user home directory in `irods_env_path` by jpmcfarland in https://github.com/UtrechtUniversity/iBridges/pull/71
* 73 check tutorials by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/75
* Feature py37 types by maartenschermer in https://github.com/UtrechtUniversity/iBridges/pull/76
* 72 export metadata by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/83
* Add close method to session and remove __del__ by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/85
* Remove the keywords.py by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/86
* 84 simplify checksum in sync by maartenschermer in https://github.com/UtrechtUniversity/iBridges/pull/88
* Fix iBridges working in Python 3.8 by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/89
* Update integration-tests-irods.yml by dometto in https://github.com/UtrechtUniversity/iBridges/pull/91
* Fix ci by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/92
* Revert "Fix ci" by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/93
* Fixing typo in README by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/95
* Update integration-tests-irods.yml by dometto in https://github.com/UtrechtUniversity/iBridges/pull/97
* Improve errors by qubixes in https://github.com/UtrechtUniversity/iBridges/pull/87
* sync: return dict of changed items by dometto in https://github.com/UtrechtUniversity/iBridges/pull/90
* fixed checksum-check NoneType error by maartenschermer in https://github.com/UtrechtUniversity/iBridges/pull/101
* Improving the error when upload or download fails by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/104
* Removing os module, tickets switched to demofile by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/106
* Bug fixes and tutorial updates by chStaiger in https://github.com/UtrechtUniversity/iBridges/pull/107

New Contributors
* jpmcfarland made their first contribution in https://github.com/UtrechtUniversity/iBridges/pull/71

**Full Changelog**: https://github.com/UtrechtUniversity/iBridges/compare/v0.1.2...v0.1.3