Illumina-utils

Latest version: v2.13

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2.13

Includes a minor fix to make NovaSeq sequencing results work again.

For some reason the vast majority of bases that are generated by NovaSeq seem to have a quality score of 30. As a result, the C33 check in `iu-filter-quality-minoche` fails all of them since it expects an over average Q30. With this change those reads are kept in downstream analyses.

2.12

Includes a fix for an `iu-trim-fastq` bug that treated compressed input/output files reported in 29 by FlorianTrigodet.

2.11

Includes a fix for the quality curve generation step reported in 28.

2.10

Performance improvements for `iu-subsample-fastq`.

2.9

semiller10 presents `v2.9` with minor updates, including the following:

* Forward and reverse reads now can be of different lengths in read merging.
* Multithreading chunk evenness fix in read merging.

2.8

Minor bug fix for multi-threaded merging of paired-end reads.

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