Inmoose

Latest version: v0.7.3

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0.5.1

- fix pycombat covariates action remove with count dataframe output

0.5.0

- add experimental support for MSVC compiler
- add R-like functions for fitting linear models in module `utils`
- add a function to compute natural cubic spines basis in module `utils`
- add tmixture functions from R package limma
- add linear model fit functions from R package limma
- add functions handling duplicated probes from R package limma
- lint code with `ruff`
- add a "differential expression analysis" section to the doc

0.4.1

- fix an incorrect github action version number

0.4.0

- support for Python 3.12
- bump github actions versions
- publish coverage report to coveralls.io
- port `edgeR` functions for differential expression to `inmoose`
- Modifiy clustering stability plot
- remove many (not all) warnings

0.3.1

- Fix issue 25 and 10 related to counts parameter data format check and gestion (when it's a pandas dataframe)
- add DESeq2 variance stabilizing transformation to the `deseq2` package
- improve the error message for confounding variable in `pycombat` package
- fix build on readthedocs

0.3.0

- add and optimize a few functions in the `utils.stats` module
- add a module featuring a port of the DESeq2 R package

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