Ipr

Improvements
- Make the generation of therapeutic options a non-default setting

Bugfixes
- Fix optional input column name typos:
- 'KIQR' -> 'kIQR' on 'diseaseKIQR', 'primarySiteKIQR' and 'biopsySiteKIQR'
- 'tmp' -> 'tmp'
- 'log2cna' -> 'log2Cna'

Breaking Changes
- Standardization of variant input file formats (new names/columns required)

New Features
- Automated Therapeutic Options
- Require comparators inputs when optional expression, mutation burden, etc. inputs are given

Improvements
- Documentation of Optional Content in the User Manual

BugFixes
- Remove feature pre-caching which caused miss of non-gene features

Improvements
- Add "size" as optional column for copy variant inputs

Initial Release