Ivadomed

[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.2.1...v2.3.0)

**BUG**

- Adapt all metrics to multiclass predictions. [View pull request](https://github.com/ivadomed/ivadomed/pull/472)
- fix run_test gpu assignation. [View pull request](https://github.com/ivadomed/ivadomed/pull/453)

**DOCUMENTATION**

- Improving documentation. [View pull request](https://github.com/ivadomed/ivadomed/pull/477)
- Tutorial fix. [View pull request](https://github.com/ivadomed/ivadomed/pull/461)

**ENHANCEMENT**

- Download data: Add models. [View pull request](https://github.com/ivadomed/ivadomed/pull/476)
- Refactoring: Changing print and exit to raise error. [View pull request](https://github.com/ivadomed/ivadomed/pull/467)
- Remove "eval" cmd. [View pull request](https://github.com/ivadomed/ivadomed/pull/465)
- Custom final activation. [View pull request](https://github.com/ivadomed/ivadomed/pull/458)
- Display version. [View pull request](https://github.com/ivadomed/ivadomed/pull/456)

**FEATURE**

- Use custom data for film. [View pull request](https://github.com/ivadomed/ivadomed/pull/460)
- Uncertainty as post-processing step. [View pull request](https://github.com/ivadomed/ivadomed/pull/459)

[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.2.0...v2.2.1)

**BUG**

- Cover image path change on README. [View pull request](https://github.com/ivadomed/ivadomed/pull/451)

[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.1.0...v2.2.0)

**BUG**

- Minor fixes prior release. [View pull request](https://github.com/ivadomed/ivadomed/pull/449)

**DEPENDENCIES**

- Modify scripts/training_curve.py to avoid tensorflow dependency. [View pull request](https://github.com/ivadomed/ivadomed/pull/396)

**DOCUMENTATION**

- Updating documentation. [View pull request](https://github.com/ivadomed/ivadomed/pull/425)
- Tutorial on uncertainty estimation. [View pull request](https://github.com/ivadomed/ivadomed/pull/399)
- Tutorial cascaded architecture. [View pull request](https://github.com/ivadomed/ivadomed/pull/389)

**ENHANCEMENT**

- Retrain model without resetting weights. [View pull request](https://github.com/ivadomed/ivadomed/pull/447)
- Normalized ReLU. [View pull request](https://github.com/ivadomed/ivadomed/pull/384)
- Create Ivadomed download function. [View pull request](https://github.com/ivadomed/ivadomed/pull/379)

**FEATURE**

- Evenly distribute subjects according to metadata. [View pull request](https://github.com/ivadomed/ivadomed/pull/423)
- Resume training. [View pull request](https://github.com/ivadomed/ivadomed/pull/416)
- Find optimal threshold with ROC analysis. [View pull request](https://github.com/ivadomed/ivadomed/pull/383)
- Generate GIF during training. [View pull request](https://github.com/ivadomed/ivadomed/pull/374)
- Add classifier model . [View pull request](https://github.com/ivadomed/ivadomed/pull/278)

**TESTING**

- Create coverage and improve testing. [View pull request](https://github.com/ivadomed/ivadomed/pull/385)

[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.0.2...v2.1.0)

**BUG**

- Automate training seed. [View pull request](https://github.com/ivadomed/ivadomed/pull/366)
- Automate training bug. [View pull request](https://github.com/ivadomed/ivadomed/pull/363)
- Apply preprocessing after filter ROI. [View pull request](https://github.com/ivadomed/ivadomed/pull/342)
- Fix bug in automate training. [View pull request](https://github.com/ivadomed/ivadomed/pull/339)
- Transformations at test time: minor fixes. [View pull request](https://github.com/ivadomed/ivadomed/pull/335)

**DOCUMENTATION**

- Documentation: metric more formal defintion. [View pull request](https://github.com/ivadomed/ivadomed/pull/357)
- Fix few documentation issues, add content. [View pull request](https://github.com/ivadomed/ivadomed/pull/341)
- Soft training: minor fixes. [View pull request](https://github.com/ivadomed/ivadomed/pull/334)
- Tutorial 01: One class segmentation 2D Unet. [View pull request](https://github.com/ivadomed/ivadomed/pull/309)

**ENHANCEMENT**

- Split dataset with no test center specified. [View pull request](https://github.com/ivadomed/ivadomed/pull/370)
- showing time after training (begin/end/duration). [View pull request](https://github.com/ivadomed/ivadomed/pull/365)
- Optimize binarization. [View pull request](https://github.com/ivadomed/ivadomed/pull/364)
- Automate training improvement. [View pull request](https://github.com/ivadomed/ivadomed/pull/362)
- Simplify code when filtering ROI. [View pull request](https://github.com/ivadomed/ivadomed/pull/361)
- Scripts: Add entry points, modify doc display, and started to add github action testing. [View pull request](https://github.com/ivadomed/ivadomed/pull/328)