Kilosort

Initial release of Kilosort4, linked with paper.

This release fixes both bugs for the spike holes problem (issue https://github.com/MouseLand/Kilosort/issues/594). The default value of the NT parameter has changed to 65,472 in configFile384. You need to use these defaults to fix the spike holes problem (or the rules specified in configFile384 for NT and ntbuff). Please recompile the CUDA functions with mexGPUall.

The release will be updated if further modifications are made (patch2, 3 etc).

Note: the previous release 3.0.1 had incorrect spike times and only fixed one of the two bugs.

UPDATE 3/8/24: this version has the "spike holes" bug from issue 594 and is only left here as a reference. Please use the new release above "Kilosort 3.0 patch0" where the main bug has been fixed. We will continue to investigate if other bugs are left that produce this behavior.

This is the last version of Kilosort 3.0 and the last Kilosort version in Matlab. No further support or code changes for Kilosort 3 will be provided beyond this release.

This release fixes both bugs for the spike holes problem (issue https://github.com/MouseLand/Kilosort/issues/594). The default value of the NT parameter has changed to 65,472 in configFile384. You need to use these defaults to fix the spike holes problem (or the rules specified in configFile384 for NT and ntbuff). Please recompile the CUDA functions with mexGPUall.

The release will be updated if further modifications are made (patch2, 3 etc).

Note: the previous release 2.5.1 had incorrect spike times and only fixed one of the two bugs.

UPDATE 3/8/24: this version has the "spike holes" bug from issue https://github.com/MouseLand/Kilosort/issues/594 and is only left here as a reference. Please use the new release above "Kilosort 2.5 patch0" where the main bug has been fixed. We will continue to investigate if other bugs are left that produce this behavior.

This release fixes a bug for the spike holes problem (issue https://github.com/MouseLand/Kilosort/issues/594). The default value of the NT parameter has changed to 65,472 in configFile384. You need to use these defaults to fix the spike holes problem (or the rules specified in configFile384 for NT and ntbuff). Please recompile the CUDA functions with mexGPUall.

The release will be updated if further modifications are made (patch2, 3 etc).

Note: this aligns the changes in Kilosort 2.0.2 to those in 2.5.2 and 3.0.2.