Mdmparis-defense-finder

Latest version: v2.0.0

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1.1.1

New versions with minor updates :
- update to macsyfinder v2
- add test files
- fix installation bugs

1.1.0

Add new systems from Adi Millman's 2022 article. Modification of PrrC and RM Type I definitions to increase detection. Modification of HMM name inside HMM files.

1.0.9

This argument is available for `defense-finder run` and `defense-finder update` :

`--models-dir TEXT Specify a directory containing your models.`

2.0.0+breakingchanges.updatedf.v2
- 111 new systems (see Release_update.tsv)
- 15 modified systems (AbiK, AbiP2, BREX, CARD_NLR, DRT, Druantia, Gao_Mza, Hachiman, Lamassu-Fam, RM, Rst_RT-nitrilase-Tm, SanaTA, Thoeris, Zorya, see Release_update.tsv for more info)
- split multiple profile into single one (to fix issue https://github.com/mdmparis/defense-finder/issues/68)
- Merge multiple DefenseFinder models (=directories) into a single one : Prevent proteins to be hit by different systems.

/ ! \ This is a breaking change with defense-finder software. These models require defense-finder version >= 2 to run.

1.0.0

Architecture modification to be able to have 7 DefenseFinder packages in a single macsydata pack and fit with macsyfinder:2.0rc6.

0.1.0

- Update models
- Split in families

0.0.3

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