Micone

------------------

Added
+++++
- ``travis-sphinx`` to automatically deploy 'sphinx' docs to ``gh-pages``
- Custom ``JsonEncoder`` class to encode json network data

Changed
+++++++
- sphix theme to ``sphinx_rtd_theme``

Fixed
+++++
- ``Network._create_network`` now removes complementary links in undirected networks

------------------

Added
+++++
- ``Network.load_data`` to create networks from files
- 'computational_metadata' to test data

Changed
+++++++
- Add 'computational_metadata' to 'correlation_data' fixtures and tests

------------------

Added
+++++
- ``Lineage.taxid`` property and tests
- ``NodesModel``, ``LinksModel`` and ``NetworkmetadataModel``
- ``Network`` class to read, write and manipulate networks and tests
- 'network_files' and 'correlation_data' fixtures for tests

Changed
+++++++
- Keys for ``MetadataType`` class
- Incorporate new keys in 'metadata.json' in test data
- Changed ``MetadataType`` from 'BaseType' to 'Model'
- Renamed ``MetadataType`` -> ``MetadataModel``

------------------

Added
+++++
- ``ChildrenmapType`` class and tests

Changed
+++++++
- Network metadata files for tests

------------------

Added
+++++
- ``Lineage`` class
- ``Otu`` class
- ``OtuValidator`` class
- ``OtuSchema`` class
- ``taxmetadata_converter`` functions to convert to and from ``qiime1`` and ``qiime2`` taxonomy formats

------------------

Added
+++++
- First release and initial commits


.. _[0.2.3]: https://github.com/dileep-kishore/micone/compare/v0.2.2...v0.2.3
.. _[0.2.2]: https://github.com/dileep-kishore/micone/compare/v0.2.1...v0.2.2
.. _[0.2.1]: https://github.com/dileep-kishore/micone/compare/v0.2.0...v0.2.1
.. _[0.2.0]: https://github.com/dileep-kishore/micone/compare/v0.1.0...v0.2.0