Mne-bids

What's Changed
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1262
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1263
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1264
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1265
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1266
* Simplify authors and copyright in all .py files (and make consistent) by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1267
* misc minor fixes by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1272
* correctly track anonymization date of empty room recordings when written simultaneously with data by drammock in https://github.com/mne-tools/mne-bids/pull/1270
* Maint: FIX CI failures (HED related) by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1273
* Update mne_bids_report.py by drammock in https://github.com/mne-tools/mne-bids/pull/1275
* MAINT: Compat with MNE 1.8 birthday date by larsoner in https://github.com/mne-tools/mne-bids/pull/1278
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1279
* minor test cleanup by drammock in https://github.com/mne-tools/mne-bids/pull/1274
* try sphinx 7.4.7 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1280
* suppress channel unit change warnings by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1282
* Add new lint rules, remove unneeded noqa calls, refine noqa calls by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1283
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1284
* include OPM channels as megmag under .pick/get_coil_types() by AmaiaBA in https://github.com/mne-tools/mne-bids/pull/1222
* Expose ignore_json, add ignore_nosub to file match/search funcs by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1281
* add contributor guide link to welcome bot by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1286
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1287
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1289
* fix doc and logging mark_channels by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1293
* MAINT: Bump to 3.10 min req by larsoner in https://github.com/mne-tools/mne-bids/pull/1297
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1296
* FIX: Workaround header dropdown rendering issue by scott-huberty in https://github.com/mne-tools/mne-bids/pull/1298
* Add event metadata handling by thht in https://github.com/mne-tools/mne-bids/pull/1285
* fixed string subID bug by Aaronearlerichardson in https://github.com/mne-tools/mne-bids/pull/1291
* Misc maintenance by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1299
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1301
* MAINT: Update BIDS Validator infrastructure by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1303
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1304
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1305
* deprecate empty list as indicator for marking all channels by drammock in https://github.com/mne-tools/mne-bids/pull/1307
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1308
* MAINT: Updates for latest MNE by larsoner in https://github.com/mne-tools/mne-bids/pull/1312
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1313
* Fix participant tsv values when `Info` contains weight and height information as numpy arrays by thht in https://github.com/mne-tools/mne-bids/pull/1310
* Add intersphinx_registry and toml-sort by mscheltienne in https://github.com/mne-tools/mne-bids/pull/1314
* Fix broken links in examples by bootstrapbill in https://github.com/mne-tools/mne-bids/pull/1316
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1317
* Fix handling of README files with extensions by thht in https://github.com/mne-tools/mne-bids/pull/1318
* remove bids-validator pin by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1322
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1326
* Add chpi to known channel list by skjerns in https://github.com/mne-tools/mne-bids/pull/1325
* Fix warning given if no events are written and task is resting state by skjerns in https://github.com/mne-tools/mne-bids/pull/1327
* Add link to mne-bids-pipeline by skjerns in https://github.com/mne-tools/mne-bids/pull/1328
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1330
* fix canonical ref by drammock in https://github.com/mne-tools/mne-bids/pull/1333
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1331
* adapt bids-validator url by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1334
* Control example order via explicit list, not via sorting titles by drammock in https://github.com/mne-tools/mne-bids/pull/1321
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1335
* REL: 0.16.0 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1336

New Contributors
* AmaiaBA made their first contribution in https://github.com/mne-tools/mne-bids/pull/1222
* thht made their first contribution in https://github.com/mne-tools/mne-bids/pull/1285
* Aaronearlerichardson made their first contribution in https://github.com/mne-tools/mne-bids/pull/1291
* bootstrapbill made their first contribution in https://github.com/mne-tools/mne-bids/pull/1316

**Full Changelog**: https://github.com/mne-tools/mne-bids/compare/v0.15.0...v0.16.0

What's Changed

* Update error messages to include EEGLAB format by laemtl in https://github.com/mne-tools/mne-bids/pull/1198
* MAINT: bump versions by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1200
* Move project config to pyproject.toml, remove BINDER support by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1202
* Remove flake8, pydocstyle, black, etc. in favor of ruff by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1203
* MRG: Use hatchling as build backend by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1204
* [MRG] add CSS to truncate long version string by drammock in https://github.com/mne-tools/mne-bids/pull/1206
* add NIRS citation by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1207
* MRG: Add defusedxml dependency to "full" variant by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1218
* [MRG] BUG: Fix dtype bug for counts by larsoner in https://github.com/mne-tools/mne-bids/pull/1227
* fully prune 'events_data' from codebase by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1229
* Do not zero-pad indices in BIDSPath entities anymore; do not warn about prepending missing dots for extensions by alexrockhill in https://github.com/mne-tools/mne-bids/pull/1215
* FIX: account for potential `.{integer}_meg4` extensions in CTF format by marakw in https://github.com/mne-tools/mne-bids/pull/1230
* MRG: Fix documentation build by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1233
* Bump ruff to v0.3.0 by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1232
* Run unit tests on Apple Silicon and bump Node version to LTS (currently 20) by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1231
* Fixup for 1231 by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1234
* bump cache for build CI by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1238
* account for optional Z in time strs by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1240
* Fix string format `"blabla" "bla"` by mscheltienne in https://github.com/mne-tools/mne-bids/pull/1243
* Update pre-commit hooks, fix sphinx_gallery by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1245
* Remove ref-names from .git_archival.txt by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1249
* [MRG] MAINT: get test suite ready for pytest >= 8 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1252
* MISC maintenance fixes by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1251
* [ADD] describing fields in `event.json` file by JuliusWelzel in https://github.com/mne-tools/mne-bids/pull/1255
* [MRG] auto-add event_id key for BAD_ACQ_SKIP by drammock in https://github.com/mne-tools/mne-bids/pull/1258
* MAINT: Setup new way of releasing by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1259
* REL: 0.15.0 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1260

New Contributors
* marakw made their first contribution in https://github.com/mne-tools/mne-bids/pull/1230
* JuliusWelzel made their first contribution in https://github.com/mne-tools/mne-bids/pull/1255

**Full Changelog**: https://github.com/mne-tools/mne-bids/compare/v0.14...v0.15.0

What's Changed
* MRG: Use explicitly public namespaces by larsoner in https://github.com/mne-tools/mne-bids/pull/1165
* Bump actions/checkout from 3 to 4 by dependabot in https://github.com/mne-tools/mne-bids/pull/1166
* MRG: Correctly handle reading when BIDS channel order differs from Raw by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1171
* MEG: Add git pre-commit configuration by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1173
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1175
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1179
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/mne-tools/mne-bids/pull/1180
* BIDSPath no longer warns on missing file by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1181
* [MRG] Add recording entity to get_entity_vals by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1182
* Fix numpy 2.0 deprecation by mscheltienne in https://github.com/mne-tools/mne-bids/pull/1184
* Bump actions/setup-node from 3 to 4 by dependabot in https://github.com/mne-tools/mne-bids/pull/1185
* MRG: Fix bug with writing ctc/cal for emptyroom by larsoner in https://github.com/mne-tools/mne-bids/pull/1189
* MAINT: Tweak test for latest MNE by larsoner in https://github.com/mne-tools/mne-bids/pull/1191
* [MRG] Add support for eeglab export by laemtl in https://github.com/mne-tools/mne-bids/pull/1187
* REL: 0.14 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1193

New Contributors
* pre-commit-ci made their first contribution in https://github.com/mne-tools/mne-bids/pull/1175

**Full Changelog**: https://github.com/mne-tools/mne-bids/compare/v0.13...v0.14

What's Changed
* MRG: Fix amending a dataset when new columns are being added to participants.tsv by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1113
* pin sphinx < 6.0 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1115
* update for new version of google analytics by agramfort in https://github.com/mne-tools/mne-bids/pull/1119
* MAINT: Use git by larsoner in https://github.com/mne-tools/mne-bids/pull/1121
* [MRG] Fix copyfile_eeglab type conflicts by laemtl in https://github.com/mne-tools/mne-bids/pull/1126
* [MRG] FIX: Convert `line_freq` and `overwrite` to proper types in CLI by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1125
* MAINT: Work around MNE change by larsoner in https://github.com/mne-tools/mne-bids/pull/1128
* MRG: Silence warnings about missing events.tsv when reading empty-room or resting-state data by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1133
* MRG: Write events.json with "sample", "value", and "trial_type" entries by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1132
* add new intersphinx by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1135
* MRG: Add sessions as official suffix by JonathanVHoecke in https://github.com/mne-tools/mne-bids/pull/1137
* MRG: Don't create directories when accessing BIDSPath.fpath by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1139
* MRG: Drop support for MNE-Python <1.3, add new CI job to cover "previous stable" MNE version by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1140
* fix version dropdown + misc maintenance by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1142
* MAINT: Use Black for formatting by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1144
* Fix name and add affiliation and orcid by richardkoehler in https://github.com/mne-tools/mne-bids/pull/1146
* filter h5py triggered numpy deprecation warning by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1148
* Add ability to delete files from a BIDS dataset by PierreGtch in https://github.com/mne-tools/mne-bids/pull/1149
* require testing data for test by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1150
* [MRG] fix(write.py): throw warning instead of error on conflicting bids versions by fordmcdonald in https://github.com/mne-tools/mne-bids/pull/1147
* misc maint prior to release by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1154
* only copy BTI headshape file if present by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1158
* test minimal vs full mne-bids install by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1161
* Fix BTi handling in mne-bids by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1160
* REL: v0.13 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1156

New Contributors
* laemtl made their first contribution in https://github.com/mne-tools/mne-bids/pull/1126
* JonathanVHoecke made their first contribution in https://github.com/mne-tools/mne-bids/pull/1137
* PierreGtch made their first contribution in https://github.com/mne-tools/mne-bids/pull/1149
* fordmcdonald made their first contribution in https://github.com/mne-tools/mne-bids/pull/1147

**Full Changelog**: https://github.com/mne-tools/mne-bids/compare/v0.12...v0.13

What's Changed
* Start developing 0.12 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1078
* avoid creating many Annotations objects in for loop by agramfort in https://github.com/mne-tools/mne-bids/pull/1079
* ENH: Better error message by larsoner in https://github.com/mne-tools/mne-bids/pull/1080
* ENH: Improve error message by larsoner in https://github.com/mne-tools/mne-bids/pull/1081
* ENH: Allow returning candidate BIDSPaths by larsoner in https://github.com/mne-tools/mne-bids/pull/1083
* ENH: Make suggestion by larsoner in https://github.com/mne-tools/mne-bids/pull/1087
* MRG: Enforce specification of all annotation descriptions in event_id if event_id is passed to write_raw_bids() by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1086
* DOC: Fix doc build by larsoner in https://github.com/mne-tools/mne-bids/pull/1091
* fix: nirs convert only auto accepted by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1092
* BUG: Fix API for candidates by larsoner in https://github.com/mne-tools/mne-bids/pull/1093
* more specific import to maybe avoid issue by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1095
* ENH: Better error message on fpath by larsoner in https://github.com/mne-tools/mne-bids/pull/1097
* ENH: Auto warning stacklevel by larsoner in https://github.com/mne-tools/mne-bids/pull/1099
* MRG: Fix writing preloaded data of a non-BIDS format with automated format conversion by hoechenberger in https://github.com/mne-tools/mne-bids/pull/1102
* [ENH] Add function to enable smart path search 1098 by moritz-gerster in https://github.com/mne-tools/mne-bids/pull/1103
* Fix CI via catching a warning by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1106
* MAINT: Update CIs and bump minimum to 3.8 by larsoner in https://github.com/mne-tools/mne-bids/pull/1108
* Add support for writing neuromag122 data to BIDS by agramfort in https://github.com/mne-tools/mne-bids/pull/1110
* [MRG] fix links, remove ubuntu 20.04 from CI by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1111
* rel: v0.12 by sappelhoff in https://github.com/mne-tools/mne-bids/pull/1112

New Contributors
* moritz-gerster made their first contribution in https://github.com/mne-tools/mne-bids/pull/1103

**Full Changelog**: https://github.com/mne-tools/mne-bids/compare/v0.11...v0.12

This is a patch release only.