First release on GitHub.
**Warning**:
In this version mpwt arguments have been changed to make the tool more flexible. Now to launch PathoLogic inference, you need the --patho argument. If you want to create BioPAX/attribute-values file, you need to use --dat and to move only the attribute-values dat files, you must use --md option. More informations in the readme.
Add:
- mulitprocessing when creating input files, moving result files and deleting PGDBs (issue 1 ).
- better Pathway-Tools error handling (issue 2 ).
- more flexible tool (issue 3 ). Change how the argument work to make the tools more flexible.
- accept GFF file (issue 5 ). Only partial support.
- an argument to show the PGDBs in ptools-local (--list).
Fix:
- issue with pop-up (issue 4 ). To avoid all the pop-ups, you need to use at least the version 22.5 of Pathway-Tools.
- when there is multiple db_xref qualifiers in the 'source' feature of the Genbank file, take the correct one.
- mpwt stops when there is PGDBs in ptools-local folder.