Nano-cat

Latest version: v0.7.2

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0.6.0

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* Implemented an interface to MATCH_ (Multipurpose Atom-Typer for CHARMM)
in Nano-CAT.
* Added a workflow for creating CP2K input files with
the MATCH-assigned atom types & charges.
* Updated the handling of assertions, see ``CAT.assertions.assertion_manager``.

0.5.5

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* Lowered Python version requirement from >=3.7 to >=3.6.

0.5.4

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* Minor updates to the logger.
* Cleaned up CAT.jobs.py.
* ``check_sys_var()`` is now only called if an ADF-specific Job is requirest.
* Job hashes are now stored in (and retrieved from) $JN.hash files (plain text).
* Added a permanent Database_ instance to .optional.database.db.
* Parsing of functional group SMILES_ strings is now carried out during the Schema_ validation.
* Updated Data-CAT_ to 0.1.2; changed status from pre-alpha to alpha
(see https://github.com/nlesc-nano/data-CAT/pull/13).

0.5.3

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* Moved Molecule to file exporting (*i.e.* .xyz and .pdb creation) from data-CAT_ to CAT_.
* Molecules can now be exported to .mol and .mol2 formats (in addition to .pdb and .xyz format).
* Increased the clarity of many exceptions (see https://github.com/nlesc-nano/CAT/issues/45).
* Updated the documentation.
* Introduced a proper logger (see https://github.com/nlesc-nano/CAT/issues/46).
* Updated data-CAT_ to 0.1.1 (https://github.com/nlesc-nano/data-CAT/pull/12) and
nano_CAT_ to 0.1.2 (https://github.com/nlesc-nano/nano-CAT/pull/10).

0.5.2

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* Added more tests.
* Added a more explicit error message to ``_smiles_to_rdmol()``.

0.5.1

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* Documentation update.
* Updated to the ligand dissociation module in nano-CAT_ (see https://github.com/nlesc-nano/nano-CAT/issues/1).
* Added the ``keep_files`` keyword to the cosmo-rs and ligand dissociation workflows.
Default value: ``True``.
* See https://github.com/nlesc-nano/nano-CAT/pull/9.

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