Napari-clusters-plotter

Latest version: v0.8.1

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0.8.1

What's Changed
* Fix setting bin number manually by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/325
* Fix color future warning by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/308
* Bump version and automatic version determination by tsmejkal in https://github.com/BiAPoL/napari-clusters-plotter/pull/336

New Contributors
* tsmejkal made their first contribution in https://github.com/BiAPoL/napari-clusters-plotter/pull/336

**Full Changelog**: https://github.com/BiAPoL/napari-clusters-plotter/compare/0.8.0...0.8.1

0.8.0

What's Changed

Support for new napari layers:
* Add support for points layer by jo-mueller in https://github.com/BiAPoL/napari-clusters-plotter/pull/256
* Add support for surface layer by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/229

Bug Fixes:
* Added explicit dependencies by jo-mueller in https://github.com/BiAPoL/napari-clusters-plotter/pull/274
* Fixed link to test badge by jo-mueller in https://github.com/BiAPoL/napari-clusters-plotter/pull/278
* Convert max label to integer before using it as parameter for np.zeros by stefanhahmann in https://github.com/BiAPoL/napari-clusters-plotter/pull/284
* Fix Tracking Layer by stefanhahmann in https://github.com/BiAPoL/napari-clusters-plotter/pull/286
* Fixing the problem of accessing properties in image layers by Cryaaa in https://github.com/BiAPoL/napari-clusters-plotter/pull/296
* Fix zooming problem by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/298
* Adding another small fix for future warning by Cryaaa in https://github.com/BiAPoL/napari-clusters-plotter/pull/309
* Fix bug where some colormaps were not displayed in the historam by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/318
* Prefer loading features from `features` rather than `properties` by jo-mueller in https://github.com/BiAPoL/napari-clusters-plotter/pull/319

Performance and Enhancements:
* Don't recalculate histogram if not necessary by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/282
* Speed-up generate cluster image by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/283
* More efficient multiple cluster selection by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/287
* Update full data only when data is changed by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/288
* Update method generate_cluster_tracks() by stefanhahmann in https://github.com/BiAPoL/napari-clusters-plotter/pull/290
* Update axes limits when plotting by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/294
* Fix opacity adjustment and set it to low non-zero value by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/280
* Fix labels layer opacity setting and bug when viewer is closed from code by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/313
* Set up automatic deployment by jo-mueller in https://github.com/BiAPoL/napari-clusters-plotter/pull/304

Documentation and Code Style:
* Add additional explanation regarding zero as a label by stefanhahmann in https://github.com/BiAPoL/napari-clusters-plotter/pull/270
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/252
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/292
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/293
* Add example dataset for tracking data. by stefanhahmann in https://github.com/BiAPoL/napari-clusters-plotter/pull/300
* Adding example data and notebooks to load the data by Cryaaa in https://github.com/BiAPoL/napari-clusters-plotter/pull/310
* Update doc layer types by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/311
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/312

Tests:
* Add more tests for layers in 3 d/4 d by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/315

New Contributors
* stefanhahmann made their first contribution in https://github.com/BiAPoL/napari-clusters-plotter/pull/270

**Full Changelog**: https://github.com/BiAPoL/napari-clusters-plotter/compare/0.7.3...0.8.0

0.7.3

What's Changed
* Make cluster image uint32 by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/259
* Remove features that contain inf by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/264


**Full Changelog**: https://github.com/BiAPoL/napari-clusters-plotter/compare/0.7.2...0.7.3

0.7.2

What's Changed
* Fix reset zoom by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/254


**Full Changelog**: https://github.com/BiAPoL/napari-clusters-plotter/compare/0.7.1...0.7.2

0.7.1

Bugfix:
* Incompatibility with pytorch on conda-forge/Windows (248 )

0.7.0

New features
* Use 2D Histogram for visualization by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/196
* Colormap pulldown for 2D histogram by marabuuu in https://github.com/BiAPoL/napari-clusters-plotter/pull/239
* Implement Histogram1D if the same measurement is selected for both axes by lazigu and zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/237
* Change highlights in timelapse data plotting to brighter colors instead of white by Cryaaa in https://github.com/BiAPoL/napari-clusters-plotter/pull/244

What else has changed
* Allow flexible cluster ids by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/205
* Pin numpy version due to incompatibility with numba by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/219
* Update tests workflow file (disable tests on windows, update versions, use codecov token) by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/231
* Fix small bugs in the plotter widget 2 by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/227
* Fixes link of the tests badge by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/233
* Don't reset zoom on redraw by thorstenwagner in https://github.com/BiAPoL/napari-clusters-plotter/pull/214
* Add more tests by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/230
* Update documentation by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/234
* Add min distance for UMAP parameter by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/235
* Add optional custom name field for dimensionality reduction by lazigu in https://github.com/BiAPoL/napari-clusters-plotter/pull/236
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/238
* Implement lowercase interpretation of keys by Cryaaa in https://github.com/BiAPoL/napari-clusters-plotter/pull/243
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/BiAPoL/napari-clusters-plotter/pull/240
* make layout slimmer by haesleinhuepf in https://github.com/BiAPoL/napari-clusters-plotter/pull/245
* Expose frame_changed method by zoccoler in https://github.com/BiAPoL/napari-clusters-plotter/pull/221

New Contributors
* marabuuu made their first contribution in https://github.com/BiAPoL/napari-clusters-plotter/pull/239

**Full Changelog**: https://github.com/BiAPoL/napari-clusters-plotter/compare/0.6.2...0.7.0

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