Nemos

Bugfix on the repr utility function.

What's Changed
* Hotfix repr by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/296


**Full Changelog**: https://github.com/flatironinstitute/nemos/compare/0.2.0...0.2.1

Overview
- New basis API. Distinct basis objects for "Conv" and "Eval" mode of operation.
- Basis `compute_features` accepts multi-dimensional inputs for both "Conv" and "Eval" bases.
- Added `IdentityEval` bases for including custom inputs in composite bases.
- Added `HistoryConv` bases to include the raw history of an input as a predictor.
- New module for applying identifiability constraints to a model matrix.
- New `SVRG` solver with optimized parameters.
- New documentation website based on `sphinx` `PyData` theme.
- Improved basis documentation: new how-to guides and summary of the available bases.
- Added examples in docstrings of user-facing methods and functions.
- Coefficient splitting method of basis.

What's Changed
* Update python versions by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/211
* Add (Prox-)SVRG as a solver for GLMs by bagibence in https://github.com/flatironinstitute/nemos/pull/184
* fix ident constraint by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/214
* Swap parameter order to match sklearn scorer by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/215
* Use pooch by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/216
* add try/except for seaborn and ipython by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/218
* improved code refs by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/219
* Change names and simplify landing page by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/223
* set up javascript animation by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/230
* renaming files in dev notes by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/231
* Development by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/233
* Add support section by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/234
* Doctest by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/232
* reordered cards by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/237
* Move overview by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/227
* prevent absolute links to docs (except badge) by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/238
* Fix sklearn test by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/240
* Bugfix basis properties by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/241
* Revert "Bugfix basis properties" by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/244
* Bugfix basis properties by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/245
* fixed warns in test_convergence.py by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/242
* Fix warns test convolution by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/246
* Development by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/239
* Splits tox into multiple jobs by billbrod in https://github.com/flatironinstitute/nemos/pull/250
* require sample axis to be axis=0 by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/254
* Initialization by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/252
* Added glm.py examples in docstrings by pranmod01 in https://github.com/flatironinstitute/nemos/pull/249
* Automatic step sizes for SVRG by bagibence in https://github.com/flatironinstitute/nemos/pull/207
* added linting tests to tox.ini and linted by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/258
* Started basis examples by pranmod01 in https://github.com/flatironinstitute/nemos/pull/253
* fixed abs links by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/262
* Start facilitating coefficient splitting by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/247
* Sphinx by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/264
* Basis refactor pr1 by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/273
* Document basis by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/274
* Multi dim eval basis by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/275
* Set shape basis method by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/276
* Improve transformer api by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/280
* Identity basis by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/282
* added decorator to simulate by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/287
* PopulationGLM sklearn clone by billbrod in https://github.com/flatironinstitute/nemos/pull/291
* fix split_by_feature bug by billbrod in https://github.com/flatironinstitute/nemos/pull/289
* Adds __repr__ for our custom classes by billbrod in https://github.com/flatironinstitute/nemos/pull/286
* Development by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/293
* Bugfix init composite basis by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/294
* New release by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/295

New Contributors
* pranmod01 made their first contribution in https://github.com/flatironinstitute/nemos/pull/249

**Full Changelog**: https://github.com/flatironinstitute/nemos/compare/0.1.6...0.2.0

NeMoS New Release

In this new release:
- **Simplified API for `GLM`:** You can now set regularization using a string. All regularization and solver hyperparameters can be passed during GLM initialization.
python
import nemos as nmo
model = nmo.glm.GLM(regularizer="Ridge", regularizer_strength=0.1)

- **New `TransformerBasis` API:** All Basis attributes are now available in `TransformerBasis`, facilitating inspection and cross-validation. See the updated tutorial in the API guide.
python
import nemos as nmo
transformer_basis = nmo.basis.RaisedCosineBasisLinear(10).to_transformer()
print(transformer_basis.n_basis_funcs) prints 10

- **Bounds for `Basis`**: Added support for specifying bounds for the range of values covered by a basis function.

What's Changed
* quickfix by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/175
* improved docstrings by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/182
* run ci only for non-draft prs by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/192
* Refactoring regularizer and solver by clewis7 in https://github.com/flatironinstitute/nemos/pull/183
* add tests for checking get_params() by clewis7 in https://github.com/flatironinstitute/nemos/pull/200
* Provide a range for basis by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/191
* update contributing guide by clewis7 in https://github.com/flatironinstitute/nemos/pull/198
* fix convergence tests by clewis7 in https://github.com/flatironinstitute/nemos/pull/206
* Update `TransformerBasis` and `Basis` to work with scikit-learn pipelining and CV by bagibence in https://github.com/flatironinstitute/nemos/pull/169
* fixed basis __call__ docstrings by BalzaniEdoardo in https://github.com/flatironinstitute/nemos/pull/209

New Contributors
* clewis7 made their first contribution in https://github.com/flatironinstitute/nemos/pull/183 🚀 🚀 🚀
* bagibence made their first contribution in https://github.com/flatironinstitute/nemos/pull/169 🚀 🚀 🚀

**Full Changelog**: https://github.com/flatironinstitute/nemos/compare/0.1.5...0.1.6

**New with this release:**
- `GammaObservations model, for fitting Gamma-GLMs.
- GLMs' `update` and `initialize_solver` methods for batching

**New with this release:**

- `GammaObservations` model, for fitting Gamma-GLMs.

- GLMs' **`update`** and **`initialize_solver`** methods for batching

This update make sure that `nemos` is compatible with `pynapple>=0.6.5`.