Ngcloud

-----

- API CHANGE: now Stage.parse() is handled by Report.parse().
Outcome behavior should remain the same
- Subclass SummaryStage from Stage.
It can access normal stages' result_info in its result_info (18)
- Add true functionality of Cufflinks page (19)
- Fix py3.3 wheel dependencies
- Move change log before 0.3 to OLDCHANGES.rst

-----

-----

- Add true functionality of Tophat page (17)
- More unified result structure (13, 14)
- Add doc for Tuxedo pipeline (16)

-----

-----

- Add true funcionality of FastQC page (finally)
- Change templates' internal folder structure.
Backward compatible but internal API has changed
(e.g. _get_builtin_template_root -> _get_builtin_report_root)
- jQuery v2.1.1 now bundles in NGCloud
- Re-design frontend development (e.g. gulpfile.coffee)
- Improve Report.copy_static() function
- Make easier for external loggers embedded into ngreport
- Fix tuxedo template path priority and its block layout, CSS
- Fix result folder finding without digit prefix

---

---

- Use Gulp.js for frontend development (11)
- No pathlib required during installation (12)
- Add API for stage static file copying (8)

Older changes can be found in OLDCHANGES.rst

-----

- PDF doc by XeLaTex (9)
- Doc update on extending builtin pipeline (10)
- Add change log into doc
- Move repo to BioCloud-TW/ngcloud on GitHub

---

---

- No self.template_config() needed (7)
- Rename Report.stage_template_cls to Report.stage_classnames

-----