Niwrap

A number of fixes to AFNI, FSL, and ANTs commands

What's Changed
* NiWrap now uses styx 0.4 (stdout output support)
* Fixed large amount of duplicated flags
* 3dAutomask by birajstha in https://github.com/childmindresearch/niwrap/pull/172
* 3dvolreg by birajstha in https://github.com/childmindresearch/niwrap/pull/174
* 3dTstat by birajstha in https://github.com/childmindresearch/niwrap/pull/173
* antsBrainExtraction by birajstha in https://github.com/childmindresearch/niwrap/pull/175
* 3dcalc by birajstha in https://github.com/childmindresearch/niwrap/pull/176
* Flirt by birajstha in https://github.com/childmindresearch/niwrap/pull/179
* mcflirt by birajstha in https://github.com/childmindresearch/niwrap/pull/177
* 3dTproject by birajstha in https://github.com/childmindresearch/niwrap/pull/180
* 3d tshift by birajstha in https://github.com/childmindresearch/niwrap/pull/182
* fslstats by birajstha in https://github.com/childmindresearch/niwrap/pull/184
* 3dBlurToFWHM by birajstha in https://github.com/childmindresearch/niwrap/pull/183


**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.3.2...v0.3.3

What's Changed
* Change `out_file` type from "File" to "String" for `fsl.applywarp` by kaitj in https://github.com/childmindresearch/niwrap/pull/169
* Fix some workbench auto generation issues Fix 170 by nx10 in https://github.com/childmindresearch/niwrap/pull/171


**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.3.1...v0.3.2

- Fix build failure

**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.3.0...v0.3.1

What's Changed
* Added a large number of LLM generated descriptors for ANTs and Freesurfer
* 3dinfo by birajstha in https://github.com/childmindresearch/niwrap/pull/159
* Update FSL descriptors by kaitj in https://github.com/childmindresearch/niwrap/pull/163
* Update FSL for new container by kaitj in https://github.com/childmindresearch/niwrap/pull/164
* Ignore mrtrix gui + cleanup commands by kaitj in https://github.com/childmindresearch/niwrap/pull/165
* Updates to AFNI by kaitj in https://github.com/childmindresearch/niwrap/pull/166
* Ignore gui commands by kaitj in https://github.com/childmindresearch/niwrap/pull/167

New Contributors
* birajstha made their first contribution in https://github.com/childmindresearch/niwrap/pull/159

**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.2.1...v0.3.0

- Fix pyproject.toml

**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.2.0...v0.2.1

What's Changed
* Add Mrtrix3Tissue fork by kaitj in https://github.com/childmindresearch/niwrap/pull/156
* mrtrix3: dwigradcheck by kaitj in https://github.com/childmindresearch/niwrap/pull/157
* Implement mutable inputs
* [3drefit mutable input](https://github.com/childmindresearch/niwrap/commit/d9c9845089bd621b1417a846f911b4bc854903ee)


**Full Changelog**: https://github.com/childmindresearch/niwrap/compare/v0.1.3...v0.2.0