Orange3-bioinformatics

Fixed
- [214](https://github.com/biolab/orange3-bioinformatics/pull/214): Fixed a problem in OWGEODatasets with filter component, [related isue](https://github.com/biolab/orange3-bioinformatics/issues/210).
- [233](https://github.com/biolab/orange3-bioinformatics/pull/233): Fixed output summary and stop showing links if they are not available, [related isue](https://github.com/biolab/orange3-bioinformatics/issues/228).
- [231](https://github.com/biolab/orange3-bioinformatics/pull/231): Properly use gene matcher in dictyExpress widget.
- [237](https://github.com/biolab/orange3-bioinformatics/pull/237): Fixed a problem with enrichment. Results from Gene Set Enrichemnt and GOBrowser widgets are now consistent, [related isue](https://github.com/biolab/orange3-bioinformatics/issues/234).
- [241](https://github.com/biolab/orange3-bioinformatics/pull/241): OWGEODatasets: Remove `wrap` reimplementation.
- [242](https://github.com/biolab/orange3-bioinformatics/pull/242): Marker genes settings migration.

Changed
- [215](https://github.com/biolab/orange3-bioinformatics/pull/215): Bump minimum version of point-annotator module.
- [216](https://github.com/biolab/orange3-bioinformatics/pull/216): Update icon for Gene Set Enrichment widget.
- [221](https://github.com/biolab/orange3-bioinformatics/pull/221): Update icons for Volcano plot and Annotate Projection widgets.
- [260](https://github.com/biolab/orange3-bioinformatics/pull/260): Update icon for dictyExpress widget.
- [219](https://github.com/biolab/orange3-bioinformatics/pull/219): Complete redesign of Marker Genes widget.
- [244](https://github.com/biolab/orange3-bioinformatics/pull/244): Unify add-on descriptions, [related isue](https://github.com/biolab/orange3/issues/4850).

Added
- [215](https://github.com/biolab/orange3-bioinformatics/pull/215): Add support for sparse data in Annotation module.
- [245](https://github.com/biolab/orange3-bioinformatics/pull/245): setup Github Actions and tox.
- [252](https://github.com/biolab/orange3-bioinformatics/pull/251): Add GenialisExpressions widget, [project status](https://github.com/biolab/orange3-bioinformatics/projects/2).

Fixed
- [203](https://github.com/biolab/orange3-bioinformatics/pull/203): Correct column data in GeneSets widget.
- [205](https://github.com/biolab/orange3-bioinformatics/pull/205): Fix issue where GeneSets widget crashed on network error. Display friendly warning that cached files are used.
- [206](https://github.com/biolab/orange3-bioinformatics/pull/206): Fix issue where GEODatasets widget crashed on network error. Display friendly warning that cached files are used.

Changed
- [168](https://github.com/biolab/orange3-bioinformatics/pull/168):
Overhaul of gene module. We no longer use pickled dictionaries to map gene names to their corresponding Entrez Ids.
We use SQLite tables that are indexed using FTS5 SQLite extension.
- [204](https://github.com/biolab/orange3-bioinformatics/pull/204):
Package cellannotation replaced with point-annotator

Added
- [13b54e7](https://github.com/biolab/orange3-bioinformatics/pull/168/commits/13b54e7d93e09283ca5edfae4f11468fc2c0b12b): HomoloGene module (Wrapper around NCBI HomoloGene database)
- [178](https://github.com/biolab/orange3-bioinformatics/pull/178): add Homology widget.

Removed
- [a713abe](https://github.com/biolab/orange3-bioinformatics/commit/a713abe3b799efcfbd40f50aa724a4924fcf6df8):
removed legacy serverfiles update scripts in favor of [bioinformatics-serverfiles.](https://github.com/JakaKokosar/bioinformatics-serverfiles)

Did not keep a changelog...