Osl-dynamics

PyPi release: https://pypi.org/project/osl-dynamics/2.0.0/

**This is the first version to be included in FSL.**

Changes:
- License changed from MIT to Apache-2.0 (needed to be changed for FSL).
- Option to stop HMM training early based on maximum fractional occupancy change.
- Removed WIP models and examples.

PyPi release: https://pypi.org/project/osl-dynamics/1.4.5/

Changes:
- New method for automated bad segment removal.
- Standalone GLM module.
- Support for loading mat73 files is deprecated.
- Various bug fixes.

PyPi release: https://pypi.org/project/osl-dynamics/1.4.4/

Changes:
- **Coherence calculation with `analysis.spectral.regression_spectra` modified: fixed issue with `nan`.**
- **Changed feature of validation split method of the Data object to split within sessions.**
- Option to save model checkpoint. This allows the user to resume training in a separate script.
- Added method to the Data object to align the sign of channels across sessions.
- Added new single-channel DyNeMo model (still a work in progress).

PyPi release: https://pypi.org/project/osl-dynamics/1.4.3/

Changes:
- Tested installation against TensorFlow versions 2.11-2.15.
- Added functions to calculate partial coherence and partial directed coherence.
- Benchmarked the multitaper calculation against the HMM-MAR.
- Update docs.

PyPi release: https://pypi.org/project/osl-dynamics/1.4.2/

Changes:
- **Cost function calculation now takes the average over the time dimension by default.**
- Option to calcalate Viterbi path with the HMM.
- Option to calculate cross multitaper spectra.
- Tweaked the scaling of subject/state-specific multitaper/welch spectra.
- Allow 3D parcellations in plotting.
- Removed source files for S/MAGE (haven't been supported for a while).

PyPi release: https://pypi.org/project/osl-dynamics/1.4.1/

Changes:
- Update tutorials.
- Reduced default buffer size (for shuffling) from 100000 to 4000.
- Updated TINDA functions.