Ott-jax

Latest version: v0.5.0

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0.2.7

What's Changed
* Pre-commit by michalk8 in https://github.com/ott-jax/ott/pull/71
* Fix/online gw by michalk8 in https://github.com/ott-jax/ott/pull/80
* Feature/improve packaging by michalk8 in https://github.com/ott-jax/ott/pull/82
* Ersi gauss bary by ersisimou in https://github.com/ott-jax/ott/pull/81

New Contributors
* ersisimou made their first contribution in https://github.com/ott-jax/ott/pull/81

**Full Changelog**: https://github.com/ott-jax/ott/compare/0.2.6...0.2.7

0.2.6

What's Changed
* Fix jit issue with relative epsilon and copying epsilons by JTT94 in https://github.com/ott-jax/ott/pull/52
* Bug/scale cost by MUCDK in https://github.com/ott-jax/ott/pull/54
* ensure 3 geom objects returned when copying epsilons by JTT94 in https://github.com/ott-jax/ott/pull/56
* fixed logic of __call__ of LRSinkhorn to prevent uninterpretable error by MUCDK in https://github.com/ott-jax/ott/pull/57
* Project import generated by Copybara. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/58
* General cost fn by JTT94 in https://github.com/ott-jax/ott/pull/61
* Set converged logic by zoepiran in https://github.com/ott-jax/ott/pull/62
* Fix `LRSinkhornOutput.apply` with batches by michalk8 in https://github.com/ott-jax/ott/pull/63
* Fix is_all_geoms_lr not returning by michalk8 in https://github.com/ott-jax/ott/pull/67
* Feature/quadratic problem scale by michalk8 in https://github.com/ott-jax/ott/pull/66
* Fix LR tests, fused_penalty property, tolerances by michalk8 in https://github.com/ott-jax/ott/pull/68
* add first version of SCOT demonstration notebook (Gromov-Wasserstein for multi-omics) by antoinebelloir in https://github.com/ott-jax/ott/pull/64
* Fix LR Gromov memory by michalk8 in https://github.com/ott-jax/ott/pull/70
* Fix `scale_cost` to LRGeometry, float/max-bound by michalk8 in https://github.com/ott-jax/ott/pull/72
* Update README to use Markdown math by adrhill in https://github.com/ott-jax/ott/pull/75
* Fix neural dual notebook by lucaeyring in https://github.com/ott-jax/ott/pull/76

New Contributors
* JTT94 made their first contribution in https://github.com/ott-jax/ott/pull/52
* MUCDK made their first contribution in https://github.com/ott-jax/ott/pull/54
* antoinebelloir made their first contribution in https://github.com/ott-jax/ott/pull/64
* adrhill made their first contribution in https://github.com/ott-jax/ott/pull/75
* lucaeyring made their first contribution in https://github.com/ott-jax/ott/pull/76

**Full Changelog**: https://github.com/ott-jax/ott/compare/0.2.5...0.2.6

0.2.5

What's Changed
* not converged logic by zoepiran in https://github.com/ott-jax/ott/pull/50

New Contributors
* zoepiran made their first contribution in https://github.com/ott-jax/ott/pull/50

**Full Changelog**: https://github.com/ott-jax/ott/compare/0.2.4...0.2.5

0.2.4

What's Changed
* Fixes rank and epsilon arguments for LR-GW (see issue 21) by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/28
* Add Neural Dual Solver and Utilities by bunnech in https://github.com/ott-jax/ott/pull/32
* Migrate away from using JaxTestCase in tests by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/35
* Adding scaling factor to the cost matrix. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/38
* Initialization LRSinkhorn by meyerscetbon in https://github.com/ott-jax/ott/pull/47
* Adding max_cost scaling for LR. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/48
* Free support Wasserstein barycenter by marcocuturi in https://github.com/ott-jax/ott/pull/49

New Contributors
* bunnech made their first contribution in https://github.com/ott-jax/ott/pull/32
* meyerscetbon made their first contribution in https://github.com/ott-jax/ott/pull/39

**Full Changelog**: https://github.com/ott-jax/ott/compare/0.2.3...0.2.4

0.2.3

What's Changed
* Update direct transport plan computation by theouscidda6 in https://github.com/ott-jax/ott/pull/5
* Updating GW notebook to work with v0.2.2, adding unbalanced and fused GW options to Transport. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/4
* Initialising linear_convergence and costs in GWState to -1 by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/6
* README example: transport.Transport -> transport.solve by bamos in https://github.com/ott-jax/ott/pull/7
* Fixes bug in transport.solve by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/8
* Remove custom vdot implementation by michalk8 in https://github.com/ott-jax/ott/pull/10
* Fixes imports in tests. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/11
* Fixes tests. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/12
* Fixes tests. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/13
* Fixing tests. by LaetitiaPapaxanthos in https://github.com/ott-jax/ott/pull/14
* Entropic regularization for LR-GW by marcocuturi in https://github.com/ott-jax/ott/pull/19
* Batch `apply_lse_kernel` for `online=True` by michalk8 in https://github.com/ott-jax/ott/pull/23

New Contributors
* theouscidda6 made their first contribution in https://github.com/ott-jax/ott/pull/5
* LaetitiaPapaxanthos made their first contribution in https://github.com/ott-jax/ott/pull/4
* bamos made their first contribution in https://github.com/ott-jax/ott/pull/7
* michalk8 made their first contribution in https://github.com/ott-jax/ott/pull/10

**Full Changelog**: https://github.com/ott-jax/ott/compare/0.2.2...0.2.3

0.2.2

Preventing bug in colab when importing ott, as flax is not a preinstalled package.

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