Outrigger

Latest version: v1.1.1

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1.1.0

------------------------

This is a minor release to outrigger``.

Bug fixes
~~~~~~~~~

- Fixed `UNIQUE ID` error that happened somewhat stochastically when adding new exons to the database


Miscellaneous
~~~~~~~~~~~~~

- Explicitly added Python 3.6 compatibility
- Change logo location to `logo/` instead of `logo/v1` since there's only one
version anyway...

1.0.0

~~~~~~~~~~~~~~~~~~~~

- Added ``GC/AG`` to valid splice sites

0.2.9

~~~~~~~~~~~~~~~~~~~

- Add ``bam`` alignment files as input option


Miscellaneous
~~~~~~~~~~~~~

- Parallelized Psi calculation, the exact number of processors can be specified
with ``--n-jobs``, and by default, ``--n-jobs`` is ``-1``, which means use as
many processors as are available.

0.2.8

---------------------------

Updated README/HISTORY files

0.2.7

~~~~~~~~~~~~~~~~~~~~

- Added version info with ``outrigger --version``
- Sped up gffutils queries and event finding by running ``ANALYZE`` on SQLite
databases.


.. _lcscs12345: https://github.com/lcscs12345

0.2.6

~~~~~~~~~~~~~~~~~~~~

- Clarified ``.gtf`` file example for directory output

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