Picked-group-fdr

- Fix GUI build
- Remove explicit llvmlite dependency

- Update job-pool to v0.3.0
- Allow for numpy v2.0

- Make --fasta_use_uniprot_id compatible with quantification
- Fix problem with missing delta mass column for andromeda2pin
- Add support for ms2rescore percolator format (23)
- Refactored update_evidence_from_pout
- Remove unsupported mq_msms argument for update_evidence_from_pout

- Fix nondeterministic behavior of decouple_connected_proteins

- Add --protein_group_fdr_threshold flag to set the protein group-level FDR cutoff for the rescuing procedure and logging messages
- Fix compatibility with Oktoberfest's new ProForma N-terminal notation
- Improved ProForma sequence format support
- Support new oktoberfest psmid with optional scan event number
- Use --psm_fdr_cutoff for "Peptide counts (unique)" column

- Switch to modified peptide instead of peptide in fragpipe parsing functions
- Make peptide flanking characters consistent across search engines. Fixes bug with percolator input used with --peptide_protein_map