Polyclonal

Latest version: v6.12

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6.12

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- Switch to using ``scipy.sparse`` arrays rather than matrices to keep up with `this <https://github.com/jbloomlab/binarymap/issues/6>`_ `change <https://github.com/jbloomlab/binarymap/pull/7>`_ to ``binarymap`` (now require ``binarymap`` >= 0.7).
- Remove pin on ``urllib3``

6.11

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- In ``lineplot_and_heatmap``, add ``mean_abs`` and ``sum_abs`` as possible site statistics, reflecting the mean and sum of the absolute values of the mutation values.

6.10

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- In ``lineplot_and_heatmap``, mutations that are hidden are by one slider filtered even if they fail other sliders. Addresses `this issue <https://github.com/dms-vep/dms-vep-pipeline-3/issues/96>`_

6.9

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- Added ``rename_std`` option to ``lineplot_and_heatmaps``, which fixes a quasi-bug introduced in the ``rename_stat_col`` option by the changes in version 6.8.

6.8

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- Add ``addtl_slider_stats_as_max`` to ``lineplot_and_heatmap``.
- Show *escape_std* in ``PolyclonalCollection.mut_escape_plot`` and ``PolyclonalCollectios.mut_icXX_plot``

6.7

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- Add ``heatmap_lims_from_slider_init`` option to ``lineplot_and_heatmap`` so that by default heatmap range is set by data shown with initial slider stats. Set this option to ``False`` if you want old behavior for plot limits
- Set default ``init_floor_at_zero`` for ``mut_icXX_plot`` to be ``True`` like for other plots.
- Ensure that wildtype identity is always shown in heatmap tooltips even if mutation is filtered.

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