Pycondor

-------------------

**New Features**:

-

**Changes**:

-

**Bug Fixes**:

-

**Documentation**:

-

-------------------

Bug fix release to get development started again.

**New Features**:

No new features added

**Changes**:

- Transition to pycondor namespace (See :pr:`149`)
- Improvements to testing and infrastructure (See :pr:`135`, :pr:`148`, :pr:`149`, :pr:`141`, and :pr:`152`)
- Use sphinx extlinks in the changelog (See :pr:`130`)

**Bug Fixes**:

- Fix counting of unready jobs in monitor (See :pr:`138`)
- Updates to the logging setup (See :pr:`129`)
- Fix issue in python 3.8 (See :pr:`140`)

**Documentation**:

- Migrate documentation to readthedocs (See :pr:`150`)

--------------------------

**New Features**:

- Adds ``visualize`` function and ``Dagman.visualize`` method for graph
visualization. (See :pr:`122`)

**Changes**:

- Updates default values of the ``universe``, ``getenv``, and
``notification`` parameters for ``Job`` objects to ``None``. Now, unless
explicitly given, the system defaults will be used.
(See :pr:`115`)

**Bug Fixes**:

- Switch to using ``os.sep`` instead of ``'/'`` as a path separator.
(See :pr:`107`)
- Fixed Windows-compability bug in ``Job.submit_job`` and ``Dagman.submit_dag``.
(See :pr:`110`)
- Removes outdated reference to ``dagman_progress`` in ``entry_points`` of
``setup.py``. (See :pr:`113`)
- Resolves a ``ResourceWarning`` and ``DeprecationWarning`` raised while
running the tests. (See :pr:`116`)
- Properly handles bytes arrays in ``get_condor_version``. (See :pr:`119`)
- Fixed a string formatting bug in ``Dagman.submit_dag`` and ``Job.submit_job``. (See :pr:`120`)

**Documentation**:

- Added conda installation instructions.
(See :pr:`104`)
- Added API documentation for command line interface.
(See :pr:`121`)

--------------------------

**New Features**:

- Adds the option to initialize a ``Job`` with an ``arguments`` parameter.
(See :pr:`90` and :pr:`102`)
- Adds the option to initialize a ``Job`` with a ``retry`` parameter, which
sets the default number of retries for all arguments of the Job if given.
(See :pr:`90`)

**Changes**:

- Adds ``FutureWarning`` about changing the default values of the ``universe``, ``getenv``, and ``notification`` parameters for ``Job`` objects to None. (See :pr:`98`)
- Removes check that a ``Job`` executable path must exist locally when the ``Job`` is being built.
(See :pr:`96`)
- Adds informative error message when ``Job.submit_job`` is called on a machine where the ``condor_submit`` command isn't available. (See :pr:`83`)
- Removes deprecated ``maxjobs`` and ``kwargs`` parameters for the ``Job.submit_job``, ``Job.build_submit``, ``Dagman.submit_dag``, and ``Dagman.build_submit`` methods. Also removes the deprecated ``dagman_progress`` command. (See :pr:`84`)


**Bug Fixes**:

- Fixes typo in ``pycondor monitor`` that was still referencing the old ``dagman_progress`` command. (See :pr:`81`)

--------------------------

**New Features**:

* Added ``dag`` parameter to ``Job`` and ``Dagman`` object initializations. (See :pr:`67`)
* Added ``submit_options`` parameter to ``Job.submit_job`` and ``Dagman.submit_dag`` methods. ``kwargs`` and ``maxjobs`` parameters for these methods are deprecated in favor of ``submit_options``. (See :pr:`71`)
* Adds ``pycondor submit`` command. Also adds replaces ``dagman_progress`` command with ``pycondor monitor``. (See :pr:`73`)

**Changes**:

* Added a check for illegal characters in Dagman submit file node names when running HTCondor version 8.7.2 or newer. (See :pr:`66`)


**Bug Fixes**:

* Fixed bug so that ``BaseNode`` objects set their submit attribute to the current working directory if not provided directly or set via an environment variable. (See :pr:`75`)

--------------------------

**New Features**:

* Added ``dagman_progress`` command line tool for displaying a progress bar for Dagman jobs.
(See :pr:`45` and :pr:`52`)
* Added environment variable option for setting submit, error, log, and output directories.
(See :pr:`50`)

**Bug Fixes**:

* Fixed bug where the queue parameter for a Job was not written to the job submit file when the Job was built by a Dagman. (See :pr:`42`)
* Fixed bug that caused a filename mismatch between a ``Job`` submit file and the error/log/output files when a named argument is added to a Job, and the Job is built with ``fancyname=True``. (See :pr:`48`)
* Fixed the Dagman submit file build procedure to include the name of Job named arguments in the Dagman node name (See :pr:`53`)