Pycroscopy

"Phoenix" branch release of pycroscopy

Here, we have completely reorganized pycroscopy to be formally part of the pycroscopy ecosystem of packages. In this new schema, the package pycroscopy contains domain-agnostic imaging and machine learning methods to be applied to sidpy datasets. For example, image windowing and tensor factorization can be done with sidpy datasets as input to the relevant pycroscopy methods. Henceforth, the Phoenix branch is being renamed 'main' and the old versions of px will exist purely on the legacy branch (or, alternatively, may be downloaded via PyPi).

Alpha Release of the phoenix version of pycroscopy. This contains some ML modules as well as image windowing, but is largely a placeholder as more functions get written in. However, there was enough interest in the windowing and the local crystallography functions that we decided to provide this alpha release.

Alpha Release of the phoenix version of pycroscopy. This contains some ML modules as well as image windowing, but is largely a placeholder as more functions get written in. However, there was enough interest in the windowing and the local crystallography functions that we decided to provide this alpha release.

* Removed content that has been moved to [BGLib](https://github.com/pycroscopy/BGlib)
* Updated import statements to be compatible with [pyUSID ](https://github.com/pycroscopy/pyUSID) [0.0.10](https://github.com/pycroscopy/pyUSID/releases/tag/0.0.10)

Release for compatibility, several bug fixes, and use of sidpy where appropriate. The BE processing notebook has also been tested to ensure that this release is compatible with the latest sidpy and pyUSID updates.

Major changes
- BEPS Data generator now functional
- Bug fixes for BE Visualization
- SHO Fit function update
- Utilizes sidpy wherever necesssary (preparation for pycroscopy ecosystem)
- hypIR bug fix
- Several bug fixes and updates to the BE odf translation tool
- Better verbosity for some functions

and many other minor changes and code cleanup mostly affecting older translators.
**This will likely be the last release of pycroscopy before the change to the new ecosystem** . Most of the BE-specific code will be moved to pyBGlib, and only some core functions of px that are domain-agnostic will remain.

Major changes to fitter class - BESHOFitter and BELoopFitter classes now extend pyUSID.process. Lots of simplification to the Fitter class - no more optimize, fit_methods, guess_methods files. These changes are for consistency and integration with pyUSID.process, and for usability for HPC.