Pyfastani

Latest version: v0.5.1

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0.2.1

Fixed
- Missing header files in the `tar.gz` distribution, preventing compilation of the wheel from source.

0.2.0

Added
- `Sketch.clear` method to remove all sequences currently in a `Sketch` and reset the list of minimizers.
- SIMD code to read and reverse-complement the input sequences efficiently on supported platforms (x86-64 with SSE2 or SSSE3, and ARM with NEON).
Changed
- Split the `Sketch` type in two depending on whether the object is at the sketching stage (`Sketch`) or at the querying stage (`Mapper`).
- `Sketch.add_genome`, `Sketch.add_draft`, `Mapper.query_genome` and `Mapper.query_draft` can now be passed a Unicode string for the sequence.
Fixed
- Integer underflow causing minimizers out of the block window to be added to the final minimizers list.

0.1.2

Changed
- Querying functions now release GIL to allow efficient parallel querying.

0.1.1

Fixed
- Source distribution missing Cython and C++ sources, thus preventing compilation.

0.1.0

Initial release.

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