* Deprecated pandas dependency by using numpy arrays for storage (thanks to mdoucet!)
* Deprecated plotting capabilities and matplotlib dependency
* Deprecated Python 2 support (via removing __future__ imports)
* Deprecated the Transformer CLI tool (not the Transformer module, though)
* Small fixes to references of the repository before the migration to neutrons
* Renamed variables to remove the `df_` prefix since we not longer use pandas DataFrames.
* Added header section to notebooks to install local pystog and matplotlib via pip