Qibo

What's Changed
* Fix docstring of `quantum_info.utils.total_variation_distance` by renatomello in https://github.com/qiboteam/qibo/pull/1461
* Remove deprecation warning, remove old `draw`, and rename `display` as `draw` in `Circuit` class by renatomello in https://github.com/qiboteam/qibo/pull/1464
* Fix definition of `fidelity` in `quantum_info.metrics` by renatomello in https://github.com/qiboteam/qibo/pull/1463
* Add `classical_tsallis_relative_entropy` to `quantum_info.entropies` by renatomello in https://github.com/qiboteam/qibo/pull/1469
* Remove circular dependency between `MeasurementResult` and `M` gate by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1465
* Extend `meyer_wallach_entanglement` to `ndarrays` by AlejandroSopena in https://github.com/qiboteam/qibo/pull/1451
* Add `partial_transpose` to `quantum_info.linalg_operations` by renatomello in https://github.com/qiboteam/qibo/pull/1462
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1477
* Add `calculate_singular_value_decompositon` as a backend method by renatomello in https://github.com/qiboteam/qibo/pull/1473
* Add `negativity` to `quantum_info.entanglement` by renatomello in https://github.com/qiboteam/qibo/pull/1456
* Optimizations for the `qibo.quantum_info.basis.pauli_basis` and `vectorization` function by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1459
* Add hook to check toml files by alecandido in https://github.com/qiboteam/qibo/pull/1480
* Fix bug in `quantum_info.linalg_operations.matrix_power` for negative powers of singular matrices by renatomello in https://github.com/qiboteam/qibo/pull/1472
* Fix `pytorch` gradients by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1450
* Skipping controlled `try/except` for `M` gate in `from_dict` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1483
* Avoid logging for missing backends by alecandido in https://github.com/qiboteam/qibo/pull/1486
* Add `hilbert_schmidt_inner_product` to `quantum_info.metrics` by renatomello in https://github.com/qiboteam/qibo/pull/1476
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1488
* Add `quantum_fisher_information_matrix` to `quantum_info.metrics` by renatomello in https://github.com/qiboteam/qibo/pull/1487
* Add (state) Schmidt decomposition to `quantum_info.linalg_operations` by renatomello in https://github.com/qiboteam/qibo/pull/1471
* Internal global backend `_Global` by csookim in https://github.com/qiboteam/qibo/pull/1440
* Add `relative_tsallis_entropy` to `quantum_info.entropies` + fix to `relative_von_neumann_entropy` by renatomello in https://github.com/qiboteam/qibo/pull/1470
* Add `GHZ` circuit function by mho291 in https://github.com/qiboteam/qibo/pull/1499
* Enabling plot circuit resolution through `dpi` argument by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1435
* Migrating TensorFlowBackend to Qiboml by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1479
* Add `to_stinespring` to `quantum_info.superoperator_transformations` by renatomello in https://github.com/qiboteam/qibo/pull/1492


**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.12...v0.2.13

What's Changed
* Optimize shortestpath in SABRE by csookim in https://github.com/qiboteam/qibo/pull/1408
* Fix root cause of bug reported in PR 1412 by renatomello in https://github.com/qiboteam/qibo/pull/1417
* Add `gates.GeneralizedRBS` gate by renatomello in https://github.com/qiboteam/qibo/pull/1373
* Tuple-related type hints by alecandido in https://github.com/qiboteam/qibo/pull/1420
* Added global unitary folding for get_noisy_circuits by mho291 in https://github.com/qiboteam/qibo/pull/1327
* Add `gates.CNOT` as a native gate in gate decomposition by csookim in https://github.com/qiboteam/qibo/pull/1422
* Fix default backend loading by alecandido in https://github.com/qiboteam/qibo/pull/1430
* Improved docs of `Hamiltonian` and `Gradients` modules by renatomello in https://github.com/qiboteam/qibo/pull/1428
* Matplotlib circuit drawer by sergiomtzlosa in https://github.com/qiboteam/qibo/pull/1370
* Serialization of measurements by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1431
* Fixes related to MPL drawer by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1444
* Fix math rendering in some docsstrings of the `quantum_info` module by renatomello in https://github.com/qiboteam/qibo/pull/1441
* Fix doc warnings by renatomello in https://github.com/qiboteam/qibo/pull/1442
* Fix Shor example by stavros11 in https://github.com/qiboteam/qibo/pull/1439
* Fix bug in `quantum_info._reshuffling` by renatomello in https://github.com/qiboteam/qibo/pull/1446
* SABRE + CircuitMap Optimization by csookim in https://github.com/qiboteam/qibo/pull/1419
* Hyperoptimizing with Optuna by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1338
* Expectation values as native backend arrays by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1382
* Allow `Circuit.draw` to display string directly by renatomello in https://github.com/qiboteam/qibo/pull/1434
* Matplotlib drawer: fix bug 1437 and add tests by sergiomtzlosa in https://github.com/qiboteam/qibo/pull/1438
* Add missing `hermitian` argument to `backend.calculate_eigenvalues` and `backend.calculate_eigenvectors` methods by renatomello in https://github.com/qiboteam/qibo/pull/1448
* Add `mutual_information` and `classical_mutual_information` to `quantum_info.entropies` by renatomello in https://github.com/qiboteam/qibo/pull/1455
* Bugfix to matrix unpacking in `CliffordBackend` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1457
* Add `total_variation_distance` to `quantum_info.utils` by renatomello in https://github.com/qiboteam/qibo/pull/1452
* Add `matrix_power` to `quantum_info.linalg_operations` by renatomello in https://github.com/qiboteam/qibo/pull/1454

New Contributors
* sergiomtzlosa made their first contribution in https://github.com/qiboteam/qibo/pull/1370

**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.11...v0.2.12

What's Changed
* `QulacsBackend` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1272
* Small `lint` improvements by renatomello in https://github.com/qiboteam/qibo/pull/1375
* Move some notebooks to `tutorials` repository by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1349
* Allow `Circuit` `kwargs` in `models.encodings` by renatomello in https://github.com/qiboteam/qibo/pull/1379
* Switch reusable workflows to v1, instead of main by alecandido in https://github.com/qiboteam/qibo/pull/1386
* Adding code of conduct by scarrazza in https://github.com/qiboteam/qibo/pull/1387
* build(deps): bump certifi from 2024.6.2 to 2024.7.4 by dependabot in https://github.com/qiboteam/qibo/pull/1381
* Coverage fix by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1288
* build(deps): bump setuptools from 69.5.1 to 70.0.0 by dependabot in https://github.com/qiboteam/qibo/pull/1391
* Symbolic Hamiltonian with constants by alecandido in https://github.com/qiboteam/qibo/pull/1389
* Autodifferentiation support for `PytorchBackend` by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1276
* Move `partial_trace` and `matrix_exponentiation` from `backend` methods to standalone functions in `quantum_info.linalg_operations` by renatomello in https://github.com/qiboteam/qibo/pull/1390
* Gate set tomography by mho291 in https://github.com/qiboteam/qibo/pull/1106
* refactor `QuantumNetwork` to support general quantum networks by Canoming in https://github.com/qiboteam/qibo/pull/1244
* Adding contact mail by scarrazza in https://github.com/qiboteam/qibo/pull/1401
* Fix `DeprecationWarning` for `numpy > 1.25` by renatomello in https://github.com/qiboteam/qibo/pull/1395
* Apply channel for Clifford circuits with `cupy` by AlejandroSopena in https://github.com/qiboteam/qibo/pull/1404
* Adjusting Clifford condition in `gates.GPI2` by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1399
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1406
* Fix math erros in `models.dbi.double_bracket` docstrings by renatomello in https://github.com/qiboteam/qibo/pull/1394
* Introduce circuit `kwargs` to `QFT` class by renatomello in https://github.com/qiboteam/qibo/pull/1393
* Reduce docs compilation warnings by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1402
* Fix backend usage in DBI intro notebook by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1378
* Fix Looping Behavior in Qibo SABRE by csookim in https://github.com/qiboteam/qibo/pull/1398
* Fix seed of two tests in `quantum_info` by renatomello in https://github.com/qiboteam/qibo/pull/1407
* Adding qulacs to extra by scarrazza in https://github.com/qiboteam/qibo/pull/1410
* Remove non-native backends by alecandido in https://github.com/qiboteam/qibo/pull/1368
* Update matplotlib by alecandido in https://github.com/qiboteam/qibo/pull/1413
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1411
* Fix complex samples by stavros11 in https://github.com/qiboteam/qibo/pull/1414

New Contributors
* csookim made their first contribution in https://github.com/qiboteam/qibo/pull/1398

**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.9...v0.2.11

What's Changed
* random_clifford casting qubits to python int by scarrazza in https://github.com/qiboteam/qibo/pull/1336
* Dbi gradient combine by Sam-XiaoyueLi in https://github.com/qiboteam/qibo/pull/1340
* Add dbi notebooks to documentation by andrea-pasquale in https://github.com/qiboteam/qibo/pull/1337
* Dbi cost functions by wrightjandrew in https://github.com/qiboteam/qibo/pull/1269
* Add `gates.gate.CCZ` by renatomello in https://github.com/qiboteam/qibo/pull/1280
* Fix CMA callback by andrea-pasquale in https://github.com/qiboteam/qibo/pull/1346
* Speed up `circuit.unitary()` using sparse matrices by andrea-pasquale in https://github.com/qiboteam/qibo/pull/1344
* Add callback to SGD and CMA-ES optimizer by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1335
* DBI 3rd order GCI by wrightjandrew in https://github.com/qiboteam/qibo/pull/1342
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1353
* build(deps-dev): bump tornado from 6.4 to 6.4.1 by dependabot in https://github.com/qiboteam/qibo/pull/1350
* Decomposition of `TOFFOLI` into `CNOT`, `T`, `TDG`, and `H` by renatomello in https://github.com/qiboteam/qibo/pull/1355
* DBI Hotfix by Edoardo-Pedicillo in https://github.com/qiboteam/qibo/pull/1343
* Fix transpiler bug by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1356
* Fix value of the spectrum returned in the `quantum_info.entropies.von_neumann_entropy` by alhajri in https://github.com/qiboteam/qibo/pull/1360
* Add `Phase-RX` gate + `qasm_label` for `GPI`, `GPI2`, and `MS` gates by mho291 in https://github.com/qiboteam/qibo/pull/1326
* Fix to logic in `quantum_info.hamming_distance` by renatomello in https://github.com/qiboteam/qibo/pull/1359
* Raise error when initial state shape is wrong by stavros11 in https://github.com/qiboteam/qibo/pull/1361
* Remove `TrotterCircuit` cache by stavros11 in https://github.com/qiboteam/qibo/pull/1371
* build(deps): bump urllib3 from 2.2.1 to 2.2.2 by dependabot in https://github.com/qiboteam/qibo/pull/1364
* Fix `Gate.matrix` and `Circuit.unitary` in the presence of `Gate.controlled_by` method by renatomello in https://github.com/qiboteam/qibo/pull/1367
* Addition of linear algebra `operations` submodule to `quantum_info` module by renatomello in https://github.com/qiboteam/qibo/pull/1372
* Fix transpiler bugs about moved measurements and duplicated gates by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1369

New Contributors
* wrightjandrew made their first contribution in https://github.com/qiboteam/qibo/pull/1269
* alhajri made their first contribution in https://github.com/qiboteam/qibo/pull/1360
* mho291 made their first contribution in https://github.com/qiboteam/qibo/pull/1326

**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.8...v0.2.9

What's Changed
* Adding gc sign conventions by marekgluza in https://github.com/qiboteam/qibo/pull/1293
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1295
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1299
* Expose DBI operators by Edoardo-Pedicillo in https://github.com/qiboteam/qibo/pull/1287
* Support Python 3.12 by alecandido in https://github.com/qiboteam/qibo/pull/1231
* Testing CI on PR opened by scarrazza in https://github.com/qiboteam/qibo/pull/1307
* Disable macos tests for pytorch circuit repetition by scarrazza in https://github.com/qiboteam/qibo/pull/1317
* `CliffordBackend` with packed bits by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1239
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1312
* Small fix in transpiler initial and final layout by Edoardo-Pedicillo in https://github.com/qiboteam/qibo/pull/1301
* build(deps): bump werkzeug from 3.0.2 to 3.0.3 by dependabot in https://github.com/qiboteam/qibo/pull/1323
* Reverting `Qibojit` and `Qibotn` dependencies by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1310
* Casting parameters as `float64` silencing `tf` warnings by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1308
* Fix tests for `cupy` and `cuquantum` backends by renatomello in https://github.com/qiboteam/qibo/pull/1238
* `MetaBackend` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1282
* build(deps): bump jinja2 from 3.1.3 to 3.1.4 by dependabot in https://github.com/qiboteam/qibo/pull/1324
* build(deps): bump requests from 2.31.0 to 2.32.2 by dependabot in https://github.com/qiboteam/qibo/pull/1331
* Align as parametrized gate by andrea-pasquale in https://github.com/qiboteam/qibo/pull/1332


**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.7...v0.2.8

What's Changed
* Add `entangling_layer` to `models.encodings` by renatomello in https://github.com/qiboteam/qibo/pull/1260
* `pytorch` backend by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1202
* Fix deep copy of `gates.M` in `Circuit.copy()` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1250
* Remove `dill` dependency by renatomello in https://github.com/qiboteam/qibo/pull/1270
* Standardize images in encoding documentation by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1278
* Minor improvement to `quantum_info.random_clifford` by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1259
* Update `gate.clifford` value in rotations given a new angle by MatteoRobbiati in https://github.com/qiboteam/qibo/pull/1257
* Improving documentation of `models.encodings.entangling_layer` by renatomello in https://github.com/qiboteam/qibo/pull/1273
* Fix doc deployment by moving `torch` import by Simone-Bordoni in https://github.com/qiboteam/qibo/pull/1281
* build(deps-dev): bump pillow from 10.2.0 to 10.3.0 by dependabot in https://github.com/qiboteam/qibo/pull/1292
* [pre-commit.ci] pre-commit autoupdate by pre-commit-ci in https://github.com/qiboteam/qibo/pull/1274
* Qcnn docs by jf-kong in https://github.com/qiboteam/qibo/pull/1275
* Fix to classical registers in to_qasm by BrunoLiegiBastonLiegi in https://github.com/qiboteam/qibo/pull/1284

New Contributors
* jf-kong made their first contribution in https://github.com/qiboteam/qibo/pull/1275

**Full Changelog**: https://github.com/qiboteam/qibo/compare/v0.2.6...v0.2.7