Querynator

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**Added**

**Fixed**

* Fixed import of site-packages in setup.py

**Dependencies**

**Deprecated**

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**Added**

* Added functionality to combine the results of the Knowledgebases in an HTML report
* Added possibility to have non-numerical chromosome columns in the input vcf
* Added deletion of CGI jobs from CGI Server after completion

**Fixed**

**Dependencies**

**Deprecated**

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**Added**

* Optional VEP annotation based filtering
* Additional metadata
* Usage of pyVCF3 to read vcf files
* Querynator ID added for filtered vcf files
* All possible reference genomes for CIViC

**Fixed**

**Dependencies**

**Deprecated**

* Usage of pysam to read vcf files

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**Added**

**Fixed**

* Rendering API docs

**Dependencies**

**Deprecated**

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**Added**

* Added functionality to query the Clinical Interpretation of Variants in Cancer (CIViC) Knowledgebase
* Added possibility to query bgzipped files

**Fixed**

**Dependencies**

**Deprecated**

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**Added**

**Fixed**

* Fix including module

**Dependencies**

**Deprecated**