- Fix issue with pysam in samtobam.py - Update installation documentation
0.3.9
- Add support for centered approach in coverage and gene_quanti (by Thorsten Bischler) - Fix bar chart creation in viz_gene_quanti (by Thorsten Bischler) - Fix style for matplotlib - Fix MA plots
0.3.8
- Add last base coverage option (by Thorsten Bischler) - Numerous fixes (several from Thorsten Bischler) - Change to bdist_wheel (PEP 0427)
0.3.7
- Add --reverse_complement flag to align subcommand - Use lib name instead of condition for DESeq2 heatmap - Add error explanation when GTF/GFF2 annotation files are used
0.3.6
- Add strand-unspecific read per gene quantification
0.3.5
- Update some pysam related function due to changes in API changes of pysam - Add further requirements (matplotlib, Biopython, pandas) - Reimplement MA plot generation - Add strand-unspecific coverage calculation - Several small code improvements